Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1380 ATGGATCAGTCTCCGCTCGTTCCAGCTGAGGTGCCGGATTTCATTGGCGGCGGTGGCGGCGGCAGCAGCAACACGAGGAACGTTTCCATGGTGAACGGTTACATTGTTTATACCAGAGCTAATATGGGACACCGGAATTTATGTAACGAAATTTCCAATACCAATGAATCTAAGAAATTCAGGATTCGCGAAGACGTAGAACCGAATGCCAAGCTTCCAATGAAAGAAAATAACGGAACAAAAATTTTGGCGGGAAAGAAGAACAAGTGTTCCGAACCGAAATGCGAGCTCAGCGTTTCGATGGTTAGGCCATTTAAGCGGTTTACACGACGGTCGGCGGCACTGGAAGGGAAAGTCGTTTCGAATGATGTTGGTGGAGAGGTGAGCGGGATATCGAGGAACAAGTTGGAAATGAAGATGTCGAAGAAGATTGTGGTCAACAAGACGCCCATGACGGTGAAGGAGCTCTTCCACACTGGTCTTCTTGATGGGGTCTCGGTGGTTTACATGGGCGGTATTAAGAAGGCTTCAGGATTACGGGGTGTTATAAGAGATCTGGGAATATTGTGCTCATGCTCTCTGTGCAATGAACGCAGGATTATTCCGCCTTCCAAATTCGAGGTCCATGCTTGTGGACAATACAGGAGAGCAGCAGAGTATATCTGCCTTGAAAATGGGAAGAGCTTGCTTGATCTATCGAGAACGTGCAGGGGAGTTCCTCTGTATGATTTGGAGGCGACAGTTCAAAACTTTCTTCGTTCTCCGCATGAAGAAAAACATTTTACTTGTAAAAGATGCAAAGGGTGTTTCCCTTTCTCATGTGCGGGAAGAGTGGGGCCCATATGCTGTTATTGTGTTGAATCGAGGAAATCTGAAGACAGTTCTGATAACGCTGTTAGCAAGAGAGTCAGGTCCCCCAGACCAATGTCTGTCTCCAATCCATCCAATGCTCCTGAGCTGTCTATTGCTTCAGAAAATAAAAGAAAAAGGAAAAAAAGAACAAAGTCATCAAAATGGGCTAACAAGTCAAAGTCTTCCAAGAGTGCTTCTATTCCTATTCTACCAAAGACGACGACTTCATGGAAGATGAGAAAGAAGGGAGTGTTCGCCATTATTTATTTATTGTTATTGACATTTTTAAAGTTTCTAAGATAA 1155 0.4459 MDQSPLVPAEVPDFIGGGGGGSSNTRNVSMVNGYIVYTRANMGHRNLCNEISNTNESKKFRIREDVEPNAKLPMKENNGTKILAGKKNKCSEPKCELSVSMVRPFKRFTRRSAALEGKVVSNDVGGEVSGISRNKLEMKMSKKIVVNKTPMTVKELFHTGLLDGVSVVYMGGIKKASGLRGVIRDLGILCSCSLCNERRIIPPSKFEVHACGQYRRAAEYICLENGKSLLDLSRTCRGVPLYDLEATVQNFLRSPHEEKHFTCKRCKGCFPFSCAGRVGPICCYCVESRKSEDSSDNAVSKRVRSPRPMSVSNPSNAPELSIASENKRKRKKRTKSSKWANKSKSSKSASIPILPKTTTSWKMRKKGVFAIIYLLLLTFLKFLR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1380 384 Pfam Tify domain binding domain 181 234 IPR032308 -
Amo06g1380 384 MobiDBLite consensus disorder prediction 1 22 - -
Amo06g1380 384 PANTHER AUTOIMMUNE REGULATOR 29 366 - -
Amo06g1380 384 MobiDBLite consensus disorder prediction 296 344 - -
Amo06g1380 384 MobiDBLite consensus disorder prediction 306 322 - -
Amo06g1380 384 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 29 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1380 Amo-Chr6 35391654 35395371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1380 142 314 PHD Transcription Factor Family AT2G36720 51.724 1.38e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1380 - - gmx:100802562 360.533