Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1336 ATGGGTTGCGAAAAAATAATTTATGAATGTATCCAAAACGAACGAAAACATAAAATTTCTTTCATGCAAAGAAAAGATGAAATCATGAAGAAAATTTCAACATTTTTAAAGTTATGTAAAGTACAATCCATAATTGAAACATACGAGGTTCAAAAGAACAATGAGACACACCCCATGATCTTTGATGGAAAAGAATTTTTCACGAACAAGAAGATCATGGATGAGGCTTAG 231 0.303 MGCEKIIYECIQNERKHKISFMQRKDEIMKKISTFLKLCKVQSIIETYEVQKNNETHPMIFDGKEFFTNKKIMDEA* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1336 76 SUPERFAMILY SRF-like 1 43 IPR036879 GO:0003677|GO:0046983
Amo06g1336 76 ProSiteProfiles MADS-box domain profile. 1 45 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1336 Amo-Chr6 32319175 32319477 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Amo06g1336 SRF-TF 0.0001 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1336 - - adu:107476111 105.916