Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1277 ATGCATATCCAGAAATTGATGAAGAATGTCAATGGCAATGCTGATAATGGTGATTCTTATCAATCTCAGAGAAAATACAGTAGATTTGAAGTTATTGATAGGTGGGATTTGATTAGGACACCTTATTTGGAGAGAGGAGAGTGTAGGGAAAACGTTCCTTTCTTTGAGAACCCTAACGTTATACTTGGAAGCTGGATGAGATTGTCAGCGTATGAAGCTGATTTTGGGTGGGAAAAGCCCTTTCATTTTGGTCCGGGTGGTGTGTGTCCTTATGACAGGGGGGTTATTTCTCCAAGGCATGGCGATGACGATGTTGATGCGTTCATGCATTTTCAGGTGGCACATATTCAAGATTTCATCATCAAGTTCTGGGAAGATATAGGAAATGCTAGTTGCAGGACAATTATAGAAGCCAACATTCTTTTTATTGGCCAAAATTCAATAAAATTGGTGGCTTTCTAG 462 0.3983 MHIQKLMKNVNGNADNGDSYQSQRKYSRFEVIDRWDLIRTPYLERGECRENVPFFENPNVILGSWMRLSAYEADFGWEKPFHFGPGGVCPYDRGVISPRHGDDDVDAFMHFQVAHIQDFIIKFWEDIGNASCRTIIEANILFIGQNSIKLVAF* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1277 153 Gene3D - 34 123 IPR023213 -
Amo06g1277 153 Pfam Transferase family 56 119 - -
Amo06g1277 153 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 36 127 - -
Amo06g1277 153 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 36 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1277 Amo-Chr6 26742923 26743669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1277 55 119 Monolignol Biosynthesis Gene Families AT5G48930 35.821 7.77e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1277 K13065 - aip:107646786 214.927