Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1250 ATGGCGGCAGGACTCTCCGCCGCAATTGCCTGGAAGCCCCTCCTCCGTCCCCACCACCACCACCACAACAAACACCAATCCTTCAATCCTCACACTCCAACGCCTGCTTCCTTCTTCAGAACACACCAGAAGCCCGCAACTATAAAGTTCACTACCTGTGTTCTCATGGAAGACCCCAAGAAAACCGCCAGRAGCCACGTGGCGGAAAGCGAAAAGGACGAAGAAGAAACCGTTGTGGTTTATCCTCAGCTGGTTCCGCCACGTGTCGCGGAGAGATTGGCCAGGAAGAAATCGGAGAGATTAACGTACCTTATTACCGCCATGATGTCTAGCTTTGGCATCACTTCCATGGCGGTCTTCGCTGTTTATTATAGATTCGCATGGCAATTTGAGGGTGGAGAAATTCCATTGTCTGAAATGTTTGGCACATTTGCTCTCTCCGTTGGTGCTGCTGTGGGTATGGAATTTTGGGCTAGGTGGGCACACAGAGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATAGACCAAGAGATGGACCCTTCGAATTGAACGATGTGTTTGCAATAATAAACGCTGTTCCTGCCATTGCTCTTCTCTCCTTCGGTTTCTTCCACAAAGGACTAYTCCCTGGCCTCTGCTTTGGTGCTGGTCTTGGAATCACAGTGTTTGGAATGGCTTACATGTTTGTGCACGATGGCTTGGTTCATAGGAGATTCCCTGTAGGTCCCATTGCCAATGTTCCCTACTTCAGAAGAGTTGCTGCTGCTCACAAACTTCACCATTCGGACAAATTCAATGGGGTGCCATATGGCCTCTTTTTGGGACCAAAGGAAATTGAAGAAGTGGGAGGGTTAGAAGAGCTTGAGAAAGAGATTAGTAGGAGAACAAAATCTTATAATAATAATAATAATAATAATAATAATAATAATAATAGTTCATGA 954 0.4696 MAAGLSAAIAWKPLLRPHHHHHNKHQSFNPHTPTPASFFRTHQKPATIKFTTCVLMEDPKKTARSHVAESEKDEEETVVVYPQLVPPRVAERLARKKSERLTYLITAMMSSFGITSMAVFAVYYRFAWQFEGGEIPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPRDGPFELNDVFAIINAVPAIALLSFGFFHKGLXPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHKLHHSDKFNGVPYGLFLGPKEIEEVGGLEELEKEISRRTKSYNNNNNNNNNNNNSS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1250 317 Pfam Fatty acid hydroxylase 150 277 IPR006694 GO:0005506|GO:0008610|GO:0016491
Amo06g1250 317 Coils Coil 289 309 - -
Amo06g1250 317 MobiDBLite consensus disorder prediction 301 317 - -
Amo06g1250 317 MobiDBLite consensus disorder prediction 297 317 - -
Amo06g1250 317 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 13 302 IPR045019 GO:0016491
Amo06g1250 317 MobiDBLite consensus disorder prediction 16 36 - -
Amo06g1250 317 PANTHER BETA-CAROTENE HYDROXYLASE 13 302 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1250 1 220 Chloroplast and Mitochondria Gene Families AT4G25700 60.000 5.38e-89 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1250 K15746 - gmx:100785541 433.335