Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1218 ATGGCATCCATTAGCAGGGGTCAAGGCGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAGCAGATTGTTAATGATGCAAAGAATGAAAAACTGGCTAGGCTGAAACAGGCCAAAGATGAGGCTGAAAAGGAGATTGCTGAACATCGAGCTCAGCTTGAGTACCAGTTTCAGAAGAAAGTTTCAGAGAGTAGCGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAAACTGAGTCAAAGATCCATCTCCTGAAATCCGAGTCTTCAAGAATATCAGGGGATGTTGTCAGCATGCTCCTCAGTTATGTAACAACCGTGAAAAATTAG 336 0.4405 MASISRGQGGIQQLLAAEQEAQQIVNDAKNEKLARLKQAKDEAEKEIAEHRAQLEYQFQKKVSESSGDSGANVKRLEQETESKIHLLKSESSRISGDVVSMLLSYVTTVKN* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1218 111 Coils Coil 11 60 - -
Amo06g1218 111 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 4 111 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo06g1218 111 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo06g1218 111 Gene3D - 2 111 - -
Amo06g1218 111 Pfam Vacuolar (H+)-ATPase G subunit 8 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo06g1218 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 4 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1218 Amo-Chr6 23955286 23957672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1218 9 111 Primary Pumps ATPases(2) AT4G23710 66.990 6.28e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1218 K02152 - gmx:100305477 174.096