Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1181 ATGATGGCCTTCTTGGCCAAAGCAATGAAGAACCCTGTGTTTATACAGAAACTCATACAGCACAAGGAGAAGAGGAAAGAGCTTGAGGATGCCATGACCAAGAAGAAGAGGAGGCCCATTGAGCAAGGGCCTAGTTGCAGCACCACTACTGTTAAGGTTGAGAATCCACCAGAGTTTGCTAGTTATGCTGGTGGCTTTGGAGCTTCTGAGCTTCAAATTCTGGGTATGGAGATGCAAGGATATGGTAGAGGGAGGCGAGGGAGTACTGAGCATGAGCAAGAGCAAGAGCAAGAGCAAGAGAGGCTTGACAAGGAGCTTGATGATGAAGGCTTCTGGGAAGAGCTGTTCAGTGAGAGTTTTGAGAGTGATTTGGACATTTCACAAGATGAAGAATAG 396 0.4697 MMAFLAKAMKNPVFIQKLIQHKEKRKELEDAMTKKKRRPIEQGPSCSTTTVKVENPPEFASYAGGFGASELQILGMEMQGYGRGRRGSTEHEQEQEQEQERLDKELDDEGFWEELFSESFESDLDISQDEE* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1181 131 MobiDBLite consensus disorder prediction 26 52 - -
Amo06g1181 131 MobiDBLite consensus disorder prediction 26 41 - -
Amo06g1181 131 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 1 126 - -
Amo06g1181 131 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 126 IPR027725 -
Amo06g1181 131 MobiDBLite consensus disorder prediction 84 108 - -
Amo06g1181 131 Coils Coil 88 108 - -
Amo06g1181 131 Coils Coil 18 38 - -
Amo06g1181 131 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1181 Amo-Chr6 21844216 21844611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1181 1 131 HSF AT3G22830 34.591 3.94e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1181 K09419 - gmx:100794264 127.872