Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1178 ATGGCTGACGAGGACTTCGATTTCACCGATAAAGTTCCTCCGTCTCTCGATCGCGCGGGAAATTCTGCATCCCAAGGGTTCAACCCAGGCTTAATAGTTCTCATTGTTGTTTTTGGATTGGTGCTTGCGTTCCTCATTGGAAATTTTGTGCTCTACACATATGCACAGAAGAACCTCCCTCCGAGAAAAAAGAAGCCAGTGTCAAAGAAGAAGATGAAGAGGGAGAGACTGAAACAAGGCGTCTCTGCACCTGGAGAATAA 261 0.4636 MADEDFDFTDKVPPSLDRAGNSASQGFNPGLIVLIVVFGLVLAFLIGNFVLYTYAQKNLPPRKKKPVSKKKMKRERLKQGVSAPGE* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1178 86 PANTHER DNA-BINDING PROTEIN S1FA2 4 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Amo06g1178 86 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 4 86 - -
Amo06g1178 86 MobiDBLite consensus disorder prediction 1 25 - -
Amo06g1178 86 MobiDBLite consensus disorder prediction 60 86 - -
Amo06g1178 86 Pfam DNA binding protein S1FA 22 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Amo06g1178 86 MobiDBLite consensus disorder prediction 62 76 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Amo06g1178 S1FA 2.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1178 - - adu:107493441 155.221