Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1166 ATGATTTTCCCCCTACGTGCAATACAAGTATCGAAGCCTATGGTTCCATGGACTAAGTCTAATTCAATGCATCAAGAGAATCAAATCAATCCTGCACCGCATGACAATCACAGCTACCAATTCACATGTAGTCTTATTGAGCAAGTAGACGAAGACTTAGCTGTATATGCAATGGCGAAGATTATCACAAATTCCCTTTTTCTACTGCTGGGAGCTCTTTCTTTCGTAGCAACGATCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGACTGTGGATTGCCTGAAAATTCTAACTACACTGAGAAGAATACAGGAATCAATTACATTTCAGATGCTAATTTCATTGATTCTGGTGTAAGTAAAACTGTGTCGCCCCAAGATAAGACTACTCATCCACAATACTTTACTTATCTTCGGAGCTTTCCTTATGGAACAAGAAACTGTTACAGAATAAATGTAACAAGTGTTACTAGATATTTAATCAGGGCTAGTTTCCTGTACGGAAACTATGACGGTCTTAATAAGCTCCCAGAATTTGATCTTTATCTTGGAGTTCATTTTTGGGACACGGTGAAATTCACAAATTCATCCGTCAGCATAAACTATGAAATTATACACACTCTATCGACGGATTATATCCATATCTGTATGGTTAACAAAGGCAAAGGGACATCATTCATTTCAGTCATAGAAATGAGGATTTTGGACAATGTCAACAATACTTATACCACTCAAGATCCAACTACGTCATTGGCACGTTTTCGAAGGTATGAAGATGATCCATATGACCGGATATGGGAGCCTTATTGGGACGACAAGTGGACACAATTAAGCAGTGGATTTAGCAGTGATAACTTGATTCAGAATGACTTTAAAGTACCAGCAGTTGTGATGGAGACTGCAGCTACACCAAAAAATGCTACTGCCTCATTAGACTTCCAGTGGGAGGATGATTATGCAGATAACAATGAAACTCAGCACCAATACTATTTCTACTTACACTTCGCTGAGTTTCGGAAGCTAGAGGAAAATCAAACAAGCTCATTCAATATCTCCTTAAATGACGTGCCTTGGGTAAGAAGGGAACTTGTATACGGTATTGCATACACCAGATATACTACAAGCCCTTTGTTTGGACACAAAAACTTTCACATTTCAATTATTCGGGCAGAATCTTCCTCCGTTCCACCAATCATCAATGCTCTTGAGATTTATTTAGTGAAAGATTTCTCATCACAGTTAGAAACCCAAAAAGATGACGCGGATGCAGTCACAAACATGAAGAGGACTTATAAAGTGGACAGTAAAAACTGGGAAGGAGATCCATGTGCACCCATTGCATACAAGTGGCAAGGTGTAGACTGTACCTCTTATGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGACCGGACATATAGCAGTTGATATATCCAAGCTTACCATGTTAAAGTCCTTAGATTTATCAAACAATGAGTTAAGGGGGACTATTCCTTCTTTTCTGGCACAACTGCAATCACTAGAATACTTGAATTTGGCAAACAACAACCTAACAGGTTCGGTTTCAAACGAACTCCTTCAAAAACAAAGTGATGGTCTATTATCCTTGAATGTGGGGCAAAATCCAAATCTATGTGCATCAACTTCATGTATCTCGCAATCAACTGATACAAGAAAGAAAGAGAATAATGCAGTTATTGCAGTGGTAGCATCAATTGCGGGGATATTACTGCTTCTAGTGATTATAGCCGCATTTATAATCTTCCTCCAGAGAAAGCAATATGGAAAAAACAACCGGAGAAGGTCCTTGAATTGGGAAGATAGACTTCGAATAGCATTAGATGCCGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTAAAATGCACAAATATTCTATTAAATGAAAACTTGCATGCCAAACTCGCTGATTTTGGATTGTCCAAATGCTTTGCGGCTGACGGCGATACGCATGTGTCGACAATTGTGGCGGGAACTCCAGGCTACCTAGATCCTGAGTATACAACATCAAACAGATTGACAGARAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAGCCRGTAGTAATGGTAAGGGAAGACATGATTCATCATATAAGTCAGCGTATTAATACAATGGTTACTAGAGGGGATATAACAAAAATTGTTGACTCAAGATTACAAAARGATTTCGACAGCAACTCTGCATGGAGAGCAGTTGAAATAGCAATGACCTCTGTGTCTGCCATTTCAGTGGAAAGACCATACATGAGTGATATAGTGAAAGAGCTAAAGGAGTGTTTGGCTGCAGAATTAGCTCGAAAACATACTAGTTGTGACCTTCAAAATGAAGATTTGGTTGGGCAGGTGAGTCTAAACTTGATTAGTACTGATATCACTCCCATAGCTAGGTAG 2478 0.3898 MIFPLRAIQVSKPMVPWTKSNSMHQENQINPAPHDNHSYQFTCSLIEQVDEDLAVYAMAKIITNSLFLLLGALSFVATIQGQDQSGFISIDCGLPENSNYTEKNTGINYISDANFIDSGVSKTVSPQDKTTHPQYFTYLRSFPYGTRNCYRINVTSVTRYLIRASFLYGNYDGLNKLPEFDLYLGVHFWDTVKFTNSSVSINYEIIHTLSTDYIHICMVNKGKGTSFISVIEMRILDNVNNTYTTQDPTTSLARFRRYEDDPYDRIWEPYWDDKWTQLSSGFSSDNLIQNDFKVPAVVMETAATPKNATASLDFQWEDDYADNNETQHQYYFYLHFAEFRKLEENQTSSFNISLNDVPWVRRELVYGIAYTRYTTSPLFGHKNFHISIIRAESSSVPPIINALEIYLVKDFSSQLETQKDDADAVTNMKRTYKVDSKNWEGDPCAPIAYKWQGVDCTSYDGFLRITSLNLSSSGLTGHIAVDISKLTMLKSLDLSNNELRGTIPSFLAQLQSLEYLNLANNNLTGSVSNELLQKQSDGLLSLNVGQNPNLCASTSCISQSTDTRKKENNAVIAVVASIAGILLLLVIIAAFIIFLQRKQYGKNNRRRSLNWEDRLRIALDAAQGLEYLHNGCKPPIIHRDVKCTNILLNENLHAKLADFGLSKCFAADGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVVMVREDMIHHISQRINTMVTRGDITKIVDSRLQKDFDSNSAWRAVEIAMTSVSAISVERPYMSDIVKELKECLAAELARKHTSCDLQNEDLVGQVSLNLISTDITPIAR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1166 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Amo06g1166 825 Gene3D Ribonuclease Inhibitor 420 542 IPR032675 -
Amo06g1166 825 Gene3D Transferase(Phosphotransferase) domain 1 596 809 - -
Amo06g1166 825 ProSiteProfiles Protein kinase domain profile. 465 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1166 825 PANTHER PUTATIVE-RELATED 73 602 - -
Amo06g1166 825 SUPERFAMILY L domain-like 448 550 - -
Amo06g1166 825 SUPERFAMILY Protein kinase-like (PK-like) 605 785 IPR011009 -
Amo06g1166 825 PRINTS Leucine-rich repeat signature 489 502 - -
Amo06g1166 825 PRINTS Leucine-rich repeat signature 510 523 - -
Amo06g1166 825 Pfam Protein kinase domain 606 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1166 825 PANTHER PUTATIVE-RELATED 603 825 - -
Amo06g1166 825 Pfam Malectin-like domain 90 407 IPR024788 -
Amo06g1166 825 ProSiteProfiles Leucine-rich repeat profile. 512 534 IPR001611 GO:0005515
Amo06g1166 825 SMART serkin_6 465 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1166 825 PANTHER OS07G0107800 PROTEIN-RELATED 73 602 - -
Amo06g1166 825 PANTHER OS07G0107800 PROTEIN-RELATED 603 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1166 Amo-Chr6 20698986 20707321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1166 606 797 Receptor kinase-like Gene Family AT1G05700 54.922 1.44e-60 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo06g1166 Malectin_like 6.9e-91 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1166 - - aip:107614772 1047.34