Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1158 GCGCCGCACCCTCCAGCTTTCACTCTCCAGGTTTCTCACACTTCTCACGCTCCCACTAGAGGCTCAACACTCTTTGTCGATGGCAGATTCCATTACAGTCGCACCCTCATCCAGCCCACAATGCGCTCGTGCATTTTATTTTGCGTTGCTGCTTTTCTAGCACTGTCATGGTTTCCATCTAGCGTCTTCATTGTCTCTTCGGTTTTAGCCCCATCGTCTCCGTCATCTCACCATCCAGCATCTCTCTACCGCTCTTTGATTTCTTTTGCCATAAGCTTTGTGCAGTGGCTGCTGCTGCTACCGGTTGCATCACTGGCGGTCCTGCTTGATGTTCTTGTCACTGTTGAAGAATCTCTTCTAGTGACCAAGAACCCCACTGATGAAGTATTTTCTAGATCAACAGTTAAGAAGGATGAGATAGAAGCAGTTGTGATGGCCACTGGTCTACACACCTCCTTTGGTATAGCGGCTTACTTGGTGGACAGCACTAACCAAAAGGAGTATGTTATCCTTCTTGCTGCAAGGGCCTCTAGGACCGAAAATCAAGATGCTATAGATGCTGCAATTGTTAGGATGCTTGCTGATCCAAAGGAGGCTTAA 600 0.48 APHPPAFTLQVSHTSHAPTRGSTLFVDGRFHYSRTLIQPTMRSCILFCVAAFLALSWFPSSVFIVSSVLAPSSPSSHHPASLYRSLISFAISFVQWLLLLPVASLAVLLDVLVTVEESLLVTKNPTDEVFSRSTVKKDEIEAVVMATGLHTSFGIAAYLVDSTNQKEYVILLAARASRTENQDAIDAAIVRMLADPKEA* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1158 199 Gene3D - 103 159 - -
Amo06g1158 199 PANTHER PLASMA MEMBRANE ATPASE 166 199 - -
Amo06g1158 199 PANTHER CALCIUM-TRANSPORTING ATPASE 166 199 - -
Amo06g1158 199 PANTHER CALCIUM-TRANSPORTING ATPASE 110 165 - -
Amo06g1158 199 Gene3D - 160 199 IPR023299 GO:0000166
Amo06g1158 199 PANTHER PLASMA MEMBRANE ATPASE 110 165 - -
Amo06g1158 199 Pfam E1-E2 ATPase 117 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1158 Amo-Chr6 19424642 19426146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1158 165 199 Primary Pumps ATPases AT4G30190 74.286 2.57e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1158 K01535 - csin:114322235 104.375