Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1143 ATGAAGTCGCCACGTCATCAAGTTTCCAATCTCACACGCGAGATAGCAAAAGAGTATAAGTTCGTTTACAACACGCTTATAAATACAGAAATGGTGGTGGTGAAGCTCAAGTCAGATCAGAGCGAGACACCACTCGGCCACTCCTTCTTCCTTGACCACCACCGTAGCCTGTTCGCCAGAGATCGCCCACTCTTCCTCGCGTTCATCCCTCTCCGTCGCGTTCTTCCTCTCGCCATTGTTCCTCGCGTTCATCCCTCCCTCTTCGGGTTCAGACGTTCTCGCCGTCAGTGGTACTCATCCGTGGTCCTCTGTTCTTACCGCCTTGACGTCCTCCGTGCTTGCTGCGTTGCCGTACACAGTTCCTGCCGCATCGCCGTCCTCCGTTCTCGTCGGTTCGCCGTCCTCCTTTCAGCGAATCAACGTCCTCTGCTTCATTGTTCAGCACTTAAGACTAGTAATTTTTTTTGGGTCCTCAAGCTTCAAACAAACATGGCTGACAAAGCGGTTACCATCAGAACAAGGAAGTTTATGACTAACAGGCTCCTCTCCAGAAAGCAATTCGTCATTGATGTTCTTCATCCAGGGAGGGCAAATGTTTCTAAGGCTGAGCTTAAGGAGAAGCTTGCTAGAATCTATGATGTTAAGGACCCCAACACCGTGTTTGTGTTCAAGTTCCGCACCCATTTTGGAGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGACACCGTTGAGAATGCTAAGAAGTATGAGCCTAAGTACAGACTTATTAGGAATGGACTTGATACTAAGGTTGAAAAGTCGAGGAAGCAAATGAAGGAGAGAAAGAACAGGGCAAAGAAGATCCGTGGAGTAAAGAAGACCAAGGCTTCTGATTCTGCCAAGGCTGGAAAGAAGAAACGAGTTTTCAAACATCATGTTCTGATTTTAAGCTTGTTGTATTGGAATTTTGTAATGGCTATTTTATTTTATAGATTCCTAGAATGA 987 0.464 MKSPRHQVSNLTREIAKEYKFVYNTLINTEMVVVKLKSDQSETPLGHSFFLDHHRSLFARDRPLFLAFIPLRRVLPLAIVPRVHPSLFGFRRSRRQWYSSVVLCSYRLDVLRACCVAVHSSCRIAVLRSRRFAVLLSANQRPLLHCSALKTSNFFWVLKLQTNMADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDSAKAGKKKRVFKHHVLILSLLYWNFVMAILFYRFLE* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1143 328 Pfam Ribosomal protein S24e 188 266 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo06g1143 328 Gene3D - 161 295 - -
Amo06g1143 328 PANTHER 40S RIBOSOMAL PROTEIN S24 164 300 - -
Amo06g1143 328 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 169 271 IPR012678 GO:0003735|GO:0005840|GO:0006412
Amo06g1143 328 PANTHER 40S RIBOSOMAL PROTEIN S24 164 300 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo06g1143 328 Hamap 30S ribosomal protein S24e [rps24e]. 167 269 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo06g1143 328 MobiDBLite consensus disorder prediction 269 293 - -
Amo06g1143 328 ProSitePatterns Ribosomal protein S24e signature. 229 251 IPR018098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1143 Amo-Chr6 18503284 18506023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1143 164 295 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.879 2.14e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1143 K02974 - gmx:100499852 259.225