Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1140 ATGGAACCTTTGCTTAACCAAAGAAAGATGTGGCTGAAGCATCCACAACTATGGAGTTTTGTTCGTTTTGCTTCAGGCGTACTTGGATTGCTCTGTTACGCTTTAAGTTCCTCCTTCAACTCTCTGTTCGGGAAATGGAACTTGCTGAAAACATTTCTTTACTGTGTCTTCAGTTTCATCATCTGCACTGCAGTTTTGTTTGTAAAGGTATCACATGGCCCAGGAAGTCTCCGACTAAAAACTCATCTGGCATTTTTGGTTCTGATGATTACATCTTTCTACTCCTTTTACTTTGATAAAGCCGTGAATGGGAAACCAGATGCATACTCTATAGCTTCTTGTGCTGCTTTTGCTGTGATGTTTCTTGGCTTGTCAAGGCATAGTCACTGCGGATTTGAAGTGGACTTGCTCTATTTCTTTCTCGCGGCTCTAACAATACAACTCATGAGGATAAAGTGGGTTTTTGGAATACTTGGAGCATGTTATAGCTATGCTCTCATCATGATCCATAGCTGTGTGGATGCTCAACAAGAAATAAATGGATATCATGGAGTCCCAGAAGAGCCTCATGTCATTCAAGTAGATCCACCAGAACTGTTATTAAATTCTAGCATTACTCAAGACAGCGCAATCACCGAAGTTGATTCGCATTGGCAAGAAGTCAATAATGATTTTGCTCTCATCAAGCCGGGCCTCTTGTCTTCTCTAAAGGCACTTAAGAAGCAGAATCGAAAACTTTTAGGCCTACTTTACGGCCAGTCCCTGATGGAGCCTTTTGATCTCGATGACAATTTGTTAATCGACATGCTTCCGTGTGAAATTATCAACAACATCAACGAAACTTTTAAGATGGCACTGGCTGCTGGATATGAGAAGGAGTGCTGCCACTTATACAGCAATTGCCGCAGGGAGTTCTTGCAACAGTTTCTTTCAGAATTAGAGTTGAAACACACACCTGAGGACCATAATGTTTTCATCACACACAACATTCTAAGTTGGAACAGAACTTTTAAAATCGCCCTCCGTGTACTATTTCTATATGAACGCAGGCTTTGTGATCGCATCTTCTTGGGATTCTCCTCAGTGGGGGATCTATCTTTTGTGCTGGCTTGCAAGGAACTCACAACTCATCTACTAAACTTTGTGAATACAATAGTAGTTGACATCCGTTCGCCTCCGGCCATGTTTAGAAGAGTGGTGAGTATGTTTGAGGAGTTGAATGACATGATTACCGAGTTGGAATCATTATTTCCTGATCAGGCCGGTGCATCGCTGAGAAACGATGCAATCAAGGCAAGGAGGAGACTAGGTGAGACAATAAGAGACGTTTTCAAAAACTTGGAGAATCTGATTCACTGTGATTCAGCCATTGCGGATGTTCCAGGAGGCATTGAACCAATCACCTGCGATGTAATGAATTGTCTTGGTGCAATAGTAAGAGTCATGCCTATGATTGAGAAAGCTTTCAAAGAATATCCTATAACAACTTGTCCTTCATTTCCTGCCAAGATAGCTTGGATGATAGAGCTGTTGGAGAACCATTTGGAAGCCAAGTACAAAATTTACACTGGAACTTCTTTGGATTATGTGGCCATGATGAATAACATTATGTATATAAAACTAGAGACACTGAAGCATTTTCCCTCTGCTCGATTGATAGACTTCGGCAGAGTCAAACGATATAGTTTCGCTGAAATTTTGGGCGATAATTGGATACAAAAGCACACCGGAGAATTCCAGAAAAACCTTGAAGACTATCAAAGAAGCTCATGGGATGAGGTGCTAGGCTTGTTGAAGTTAGACAACAACAACGAATCACTGGCAAAAGATGTAGCAATTGAGTCCATGAAAGAGAAGTTAAAGTTGTTCAACATTCAATTTGAGGAGATATGTTGCACTCAGTCTAAATGGTTTGGCAGCTATGAAATACGGAAAGAGATAATAGTATCCGTAGAAAACATGTTGTTGCCGGCATATGGAAGCTTCATTGGAAGGCTCCAGGATGTTCTTGGCAAGGCTTCTTATGACTATATACAGTATGGAATGCTTGAAATTAAAGCTCGGCTCAATCATGGCGTCCTTGGTCTTCAAGATTCAGCGGTGGCTGAAGCAGCCAAAGCTGCCAAGGGGAAGCCGGATGCATATGGTCTGGCTTCTTGTGCTGCGTTTGCTGTGATGTCATTCAGTTTGTCAAGACGCACTCGCTGCGGATTTGAAGTGGACATGCTATATTTCTTTTTGGGAGCTCTGATAGTACAACTCATGAAGATAAAATGGGTGTTGGGTATAGCTGGAGCAGGTTTCAGTTATTTCCTAATCGTTCTCTTTTCTTGGTTAGATGATCCACAACCTGAAGAAAATGGATATATTGAACTCCAAGATCAGCCTCAAGTGATCATTCAGGTAGGTTCACTACAACCACGAGAATCCAATGCTAGCAGTGGTAGTGCTCCTGTTTCCACACAACCAGAGGCCAATATTCAAGATCAAGCAACCATTGATGGGGATTCACATTCGCAAAAAGCCAATGCTGATTTTGCTCTTATAAAGCCACATCTGTTGGTTTCTTTAAAAGCACTTAAGAAACAGAACCAGAAAATTTTTGGCTTGCTTTACGGCCAGTCTTTGGTAGATTCCATTCAGCATGACCACAACTTGTTTACTGACGTGATTCCATTGAAAATTATCAATCGCCTTAATGGAGCTGTTAAAATTGCGGCTGCCAATGGGTTTGAGAAGGAGTGGTGCCAGTTATACAGCAGTTGTCGCAGAGAGTTCTTGCACCAGTGCCTTTCCAAGTTAGAGTTGGAAGACTTAAACAACATAGACAAGAACACATTGGACAGGATTTCAAGTTGGAGAGAAGGTTTTCGTATTGCAATCCACAAATTGTTTCCTGCCGAAAGGAGACTTTGCAATCGTGTTTTCTTTGGATTCTCCTCCCTTGAAGATCTGACTTTCATGTTGATTTGCAAAGAACTCACCGTTTATTTCCTAAACTTTGCAAATACTGTTGCAAATACTACTCCATTTGAAAACAGTTGGAGAAGTACTTTAGCAAGCCAAGTGGAAATGTTTAGGGGCATGTGTGACATGATACCTGGATTGGAATCGGTGTTCCCTGATCAGCACAGTGCGCTACTAAAAATTGAAGCAATGATGACTCGACAAAGATTGGGTGAGAAGATTAGGGATGTTTTCAAAGACATGGAGAATCTGATTTGCTGTGATTCAGCTATTGTGGATGTTGTAGGTGACGTTGATGTGCTTACCTACAACATCATGTATGGTCTTAGTGTAGCATTGAGAAATTGGGATATAATTGAGAAGGCTCTCATAGAGTATCCCATGGGCATTAATAAAGGGGGATCTTATCCTTCACTTTCTTCCCAGATAGCTCGGATAGTGGAGTTGCTGGATAACCACTTAGAAGCCAAATGCAAAACCTACACTGATCCTGCTTTGGGACATGTTGCCATGTTGAATAATGTCACGTTCATCACACAAAGGGTACTGCATCATCCTTCCATAGCCCGATTTCGGAGCGATAACTACAGTTCCGCTAACATTTGGGATGAAGATTGGATGAAAAAGTGCACAGCGAAAATTCGGCAAAACCTTGAAGATTATAAAAGAAGTTCATGGAATGAGGTGCTGGGCTTATTGAAGCTGGATAACAATGAATCACTGGAAAATAATGTAGCAGCTGAGTCCATGAAAGAGAAGCTAAAGTTGTTCAACGTTCAATTTGAGGAGATATGCTGCACTCAGTCTAAATGGTTTGCTAGGGATGATATACGGAAAGAGATAATAGTATCCGTAGAAAACATTTTGTTACCAGCATATGGAAGCTTCGTTGGAAGGCTCCAGGATGTTCTCGGTAAGGCTGCTTATGACTATATACAGTATGGAATGCTTGACATTCAAGATCGACTCAACCGCCTTTTTCTTGGAGACAAGCGGATGAGTCGGTAG 3975 0.4151 MEPLLNQRKMWLKHPQLWSFVRFASGVLGLLCYALSSSFNSLFGKWNLLKTFLYCVFSFIICTAVLFVKVSHGPGSLRLKTHLAFLVLMITSFYSFYFDKAVNGKPDAYSIASCAAFAVMFLGLSRHSHCGFEVDLLYFFLAALTIQLMRIKWVFGILGACYSYALIMIHSCVDAQQEINGYHGVPEEPHVIQVDPPELLLNSSITQDSAITEVDSHWQEVNNDFALIKPGLLSSLKALKKQNRKLLGLLYGQSLMEPFDLDDNLLIDMLPCEIINNINETFKMALAAGYEKECCHLYSNCRREFLQQFLSELELKHTPEDHNVFITHNILSWNRTFKIALRVLFLYERRLCDRIFLGFSSVGDLSFVLACKELTTHLLNFVNTIVVDIRSPPAMFRRVVSMFEELNDMITELESLFPDQAGASLRNDAIKARRRLGETIRDVFKNLENLIHCDSAIADVPGGIEPITCDVMNCLGAIVRVMPMIEKAFKEYPITTCPSFPAKIAWMIELLENHLEAKYKIYTGTSLDYVAMMNNIMYIKLETLKHFPSARLIDFGRVKRYSFAEILGDNWIQKHTGEFQKNLEDYQRSSWDEVLGLLKLDNNNESLAKDVAIESMKEKLKLFNIQFEEICCTQSKWFGSYEIRKEIIVSVENMLLPAYGSFIGRLQDVLGKASYDYIQYGMLEIKARLNHGVLGLQDSAVAEAAKAAKGKPDAYGLASCAAFAVMSFSLSRRTRCGFEVDMLYFFLGALIVQLMKIKWVLGIAGAGFSYFLIVLFSWLDDPQPEENGYIELQDQPQVIIQVGSLQPRESNASSGSAPVSTQPEANIQDQATIDGDSHSQKANADFALIKPHLLVSLKALKKQNQKIFGLLYGQSLVDSIQHDHNLFTDVIPLKIINRLNGAVKIAAANGFEKEWCQLYSSCRREFLHQCLSKLELEDLNNIDKNTLDRISSWREGFRIAIHKLFPAERRLCNRVFFGFSSLEDLTFMLICKELTVYFLNFANTVANTTPFENSWRSTLASQVEMFRGMCDMIPGLESVFPDQHSALLKIEAMMTRQRLGEKIRDVFKDMENLICCDSAIVDVVGDVDVLTYNIMYGLSVALRNWDIIEKALIEYPMGINKGGSYPSLSSQIARIVELLDNHLEAKCKTYTDPALGHVAMLNNVTFITQRVLHHPSIARFRSDNYSSANIWDEDWMKKCTAKIRQNLEDYKRSSWNEVLGLLKLDNNESLENNVAAESMKEKLKLFNVQFEEICCTQSKWFARDDIRKEIIVSVENILLPAYGSFVGRLQDVLGKAAYDYIQYGMLDIQDRLNRLFLGDKRMSR* 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1140 1324 Gene3D Exocyst complex component Exo70 203 692 - -
Amo06g1140 1324 Gene3D Exocyst complex component Exo70 831 1324 - -
Amo06g1140 1324 SUPERFAMILY Cullin repeat-like 234 690 IPR016159 -
Amo06g1140 1324 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 691 IPR004140 GO:0000145|GO:0006887
Amo06g1140 1324 PANTHER PROTEIN, PUTATIVE-RELATED 9 691 - -
Amo06g1140 1324 PANTHER PROTEIN, PUTATIVE-RELATED 697 1318 - -
Amo06g1140 1324 SUPERFAMILY Cullin repeat-like 878 1316 IPR016159 -
Amo06g1140 1324 Pfam Exo70 exocyst complex subunit 332 690 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo06g1140 1324 Pfam Exo70 exocyst complex subunit 952 1313 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo06g1140 1324 PANTHER EXOCYST COMPLEX PROTEIN EXO70 697 1318 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1140 Amo-Chr6 18269624 18281924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1140 262 691 EXO70 exocyst subunit family AT5G58430 42.534 1.08e-97 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1140 - - aip:107607041 1243.41