Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1133 ATGGCGCCTTCTTCTTCTTCAACTTCCACTGATCAAGCCTCTGCCAAGAAGGTCAGAAAGCCTTACACCATTACCAAATCCAGAGAGAGCTGGTCCGACGAAGAACACGACAAGTTCCTCGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAGGATTTTGTAGGCTCAAAAACTGTTATTCAGATTCGTAGCCATGCCCAAAAGTACTTCTTGAAAGTTCAAAAGAACGGGACAACTGCACATGTGCCTCCTCCTCGTCCTAAGCGAAAAGCTGCTCACCCTTAYCCACAAAAGGCAKCAAAAAATGTTTTGATGCCATTTCCAGCATCTATTGCTTATGATTCTTCAAGAAACACCCTTTTACCTGGCTATGCAGTAACATGGGATGAAAATTCAATGCTCATGAATGCTGAATCCAATAAACTCATGCCCTGCCAGGATGAACTCATCACAAATCTTACTGGAAATGAAGATGATATTGGATCAAGGGGGATTAGAATGCCGGCGGCTACTGAGATGCCAAATCATGGAAAACAAGCTTGTGTAATTCCTGGTTTGCCGGATTTTGCTGAAGTTTACAGCTTTATTGGAAGCGTTTTTGATCCTGACACTAGAGGCCATGTTCATAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAAAAATCTCACAATCAACTTGTCTAGCCCTGACATTGAGCCCTTTAAGAAGGCATTGTCGTTATATGATGTCAATACAAAGACAGTTGGAATTGAATGTCAAGAAGCAAACAAATGA 804 0.408 MAPSSSSTSTDQASAKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTTAHVPPPRPKRKAAHPYPQKAXKNVLMPFPASIAYDSSRNTLLPGYAVTWDENSMLMNAESNKLMPCQDELITNLTGNEDDIGSRGIRMPAATEMPNHGKQACVIPGLPDFAEVYSFIGSVFDPDTRGHVHKLKEMDPINFETVLLLMKNLTINLSSPDIEPFKKALSLYDVNTKTVGIECQEANK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1133 267 PANTHER PROTEIN REVEILLE 8 6 263 - -
Amo06g1133 267 PANTHER SWI/SNF COMPLEX-RELATED 6 263 - -
Amo06g1133 267 ProSiteProfiles SANT domain profile. 26 79 IPR017884 -
Amo06g1133 267 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 26 75 IPR006447 GO:0003677
Amo06g1133 267 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Amo06g1133 267 MobiDBLite consensus disorder prediction 1 16 - -
Amo06g1133 267 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
Amo06g1133 267 ProSiteProfiles Myb-like domain profile. 23 73 IPR001005 -
Amo06g1133 267 Gene3D - 31 78 - -
Amo06g1133 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 77 IPR017930 -
Amo06g1133 267 MobiDBLite consensus disorder prediction 1 27 - -
Amo06g1133 267 SMART sant 27 75 IPR001005 -
Amo06g1133 267 CDD SANT 30 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1133 Amo-Chr6 18027081 18030391 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo06g1133 Myb_DNA-binding 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1133 - - gmx:100783482 386.341