Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1119 ATGCTTCTCTCTATCTCAGTTCTCACACCAAAGCTTCAGTTATTTATAACAATGGAGGAGAACGGAGCGCTCTTCCTCTTCTCTCTCTCACTTCTACTTCTCCCGCTTTCCTCCTCTTCCGCTCAGATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTTCAGAAAATTTCACTGATGAGATTGGTCTTAAATGGAGCCCTGATGATAAGCTTCCTTATGGAGAAGTAAGCACCATATCAGTTGCAAACGAGACGCGGCGGCAGTACACCACGCTTAGACACTTCCCTGCTGATACCAAGAAATACTGCTACACACTTGATGTTGTGAGCAGGACAAGGTACCTACTGAGGGCCGCATTCCTGTATGGGAACTTTGATAATAACAATGTTTATCCTAAATTTGACATTTCTATTGGGGCTACACATTGGTCTACCATTGTTATATCAGATGCTAACCTTATAGAAATGAGAGAGCTTATATTTTTGGCTTCAAGTTCTGCTGTGAGTGTGTGTTTATCGAACGCCACAACAGGGCAGCCGTTCATATCTACACTTGAGCTCCGGCAATTCAATGGTTCCGTTTATTATACACAATATGAGGAACAATTTTACCTCAGTGTCTCTGCACGGATAAATTTTGGAGCAGAAAGTGATGCTCCAATCAGGTATCCTGATGATCCTTTTGATAGAATATGGGAGTCGGATTCTGTGAAGAAAGCAAATTTTCTTGTTGATGTTGCTGATGGTACCAAGAAAATCTCAACCGAAGTACCAATTGATGTTAACAGAGACGAAATACCCCCAATGAAAGTGATGCAGACAGCAGTAGTAGGCACAAATGGGTCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCTCTTATTGTGCAGAAATTGAAGATTTAGGTCCAAATGATTCCAGAAAATTTAGGCTAGTACTTCCAGGCCAGCCTGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAGGGAAAGTATCGCCTCTATGAACCAGGATTTAACAACATATCCCTGCCCTTTGTGCTTTCTTTTAGATTTGGCAAGACCTCTGATTCTTCCAAGGGTCCTCTTCTAAATGCAATGGAGATAAATAAATATTTGGAGAAAAATGATGGCTCTATTGATTTAGCAGCTGTTTCTAGTGTATTGTCACACTACCCTTCGGCAGATTGGGCACAAGAGGGAGGGGACCCTTGTCTACCTGTTCCATGGTCATGGATCCGCTGTAATTCGGATCCTCAACCAAAAGTAGTTTCAGTCTTATTGTCCGGTAAAAACCTGACTGGAAATATTCCTTTGGATATCACCAAACTGACTGGTCTAGTTGAACTATGGCTTGATGGAAACATGTTAACTGGCCCAATACCAGATTTTACTGGGTGCATGAACATAAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGTCCTCCCAACATCTCTGCTGAACCTTCCAAATTTAGGAGAAATGTATGTGCAAAATAATTTGTTATCTGGAACAATACCATCTGCTCTTCTGAGCAAAGATTTGGTTTTAGACTACTCTGGAAACATTAATCTTCACAGGGGGAAAAGAATAGAGGGCAAAACGTATGTTATTATCGGTTCCACAGTGGGGGCTTCTGTTCTACTATTGGCCACTATTATATCTTACTTGTTTATGCGTAAAGGAAATAGAAGGTATTTTGAGCAAGATCACAACTCTTCTCTCCCTACTCAAAAGCTGGCTTCCTGGAAAAATGATGATGCTGCAGAAACTGCTCACTGCTTCAGTTTTTCCGAAATTTTAAATGCCACAAATAATTTTGAGAAAAAGATTGGTTCTGGTGGTTTTGGAGTTGTGTACTACGGGAAACTGAAAGATGGAAAAGAGATAGCTGTAAAAGTTTTGACCAATAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACACTTCTTTCAAGAATACATCACAGAAATTTGGTACAGCTTCTTGGGTATTGCCGGGAGGAAGATAGTAGCATGCTCGTTTATGAATTCATGCACAATGGAACTCTCAAGGAACATCTCTATGGTCCATTAACGCATGGACGGAGTATCAATTGGATTAAGCGGCTTGAGGTTGCAGAAGATGCTGCAAAAGGGATTGAATACCTTCATACGGGTTGTATTCCTGTCGTTATCCATAGAGATGTAAAAAGCAGCAATATTCTTCTTGACAAGCAAATGAGAGCTAAGGTCTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGAGTTTCCCATGTTTCTAGCATAGTTCGGGGGACAGTAGGATATCTTGATCCTGAGTACTATATCTCCCAGCAGCTGACTGACAAGAGCGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGACAAGAAGCAATATCAAATGAAAACTTTGGTGTTAACTGCCGAAACATAGTCCAGTGGGCAAAATTTCACATTGAGAGTGGTGACATACAAGGAATTATTGACCCCATGCTAAGGAATGATTACGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGATATATGAGGCCGTCGATTTCTGAAGTTCTGAAGGAGATCCAAGATGCAATCGCTATTGAGAGAGAGGCTGAAAGCAATTCACGTGGCTTGTCAAGAAATTCTTTCCACTCTTCCGTGAACATAGGTTCAATGGATCTAGGTGCCACTGAGAGTTATCTCTCAATTGATGAATCCATTGCACGCCCAACCGCAAGATAA 2823 0.4106 MLLSISVLTPKLQLFITMEENGALFLFSLSLLLLPLSSSSAQMQGFVSLDCGGSENFTDEIGLKWSPDDKLPYGEVSTISVANETRRQYTTLRHFPADTKKYCYTLDVVSRTRYLLRAAFLYGNFDNNNVYPKFDISIGATHWSTIVISDANLIEMRELIFLASSSAVSVCLSNATTGQPFISTLELRQFNGSVYYTQYEEQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANFLVDVADGTKKISTEVPIDVNRDEIPPMKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFSYCAEIEDLGPNDSRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFNNISLPFVLSFRFGKTSDSSKGPLLNAMEINKYLEKNDGSIDLAAVSSVLSHYPSADWAQEGGDPCLPVPWSWIRCNSDPQPKVVSVLLSGKNLTGNIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMNIKIIHLENNQLTGVLPTSLLNLPNLGEMYVQNNLLSGTIPSALLSKDLVLDYSGNINLHRGKRIEGKTYVIIGSTVGASVLLLATIISYLFMRKGNRRYFEQDHNSSLPTQKLASWKNDDAAETAHCFSFSEILNATNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDSSMLVYEFMHNGTLKEHLYGPLTHGRSINWIKRLEVAEDAAKGIEYLHTGCIPVVIHRDVKSSNILLDKQMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNENFGVNCRNIVQWAKFHIESGDIQGIIDPMLRNDYDLQSMWKIAEKALMCVQPHGYMRPSISEVLKEIQDAIAIEREAESNSRGLSRNSFHSSVNIGSMDLGATESYLSIDESIARPTAR* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1119 940 SUPERFAMILY Protein kinase-like (PK-like) 602 891 IPR011009 -
Amo06g1119 940 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Amo06g1119 940 SUPERFAMILY L domain-like 417 523 - -
Amo06g1119 940 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Amo06g1119 940 PANTHER OS07G0107800 PROTEIN-RELATED 29 940 - -
Amo06g1119 940 PANTHER TYROSINE KINASE DOMAIN PROTEIN 29 940 - -
Amo06g1119 940 Pfam Protein tyrosine and serine/threonine kinase 618 818 IPR001245 GO:0004672|GO:0006468
Amo06g1119 940 Pfam Malectin-like domain 49 379 IPR024788 -
Amo06g1119 940 CDD STKc_IRAK 622 889 - -
Amo06g1119 940 Gene3D Ribonuclease Inhibitor 391 541 IPR032675 -
Amo06g1119 940 Gene3D Transferase(Phosphotransferase) domain 1 692 912 - -
Amo06g1119 940 Gene3D Phosphorylase Kinase; domain 1 590 691 - -
Amo06g1119 940 ProSiteProfiles Protein kinase domain profile. 616 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1119 940 SMART serkin_6 616 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1119 Amo-Chr6 17601097 17611290 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1119 36 726 Receptor kinase-like Gene Family AT2G37050 68.052 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo06g1119 Malectin_like 2.9e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1119 - - gmx:100784017 1612.82