Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1115 ATGGAGGAGAACGGAGCGCTCTTCCTCTTCTCTCTCTCACTTCTACTTCTCCCGCTTTCCTCCTCTTCCGCTCAGATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTTCAGAAAATTTCACTGATGAGATTGGTCTTAAATGGAGCCCTGATGATAAGCTTCCTTATGGAGAAGTAAGCACCATATCAGTTGCGAACGAGACACGGCGGCAGTACACCACGCTTAGACACTTCCCTGCTGATACCAAGAAATACTGCTACACACTTGATGTTGTGAGCAGGACAAGGTACCTACTGAGGGCCGCATTCCTGTATGGGAACTTTGATAATAACAATGTTTATCCTAAATTTGACATTTCTGTTGGGGCTACACATTGGTCTACCATTGTTATATCAGATGCTAACCTTATAGAAATGAGAGAGCTTATATTTTTGGCCTCAAGTTCTGCTGTGAGTGTGTGCTTATCGAACGCCACAACAGGGCAGCCGTTCATATCTACACTTGAGCTCCGGCAATTCAATGGTTCAGTTTATTATACACAATATGAGGAACAATTTTACCTCAGTGTCTCTGCACGGATAAATTTTGGAGCAGAAAGTGATGCTCCAATCAGGTATCCTGATGATCCTTTTGATAGAATATGGGAGTCAGATTCTGTGAAGAAAGCAAATTTTCTTGTTGATGTTGCTGATGGTACCAAGAAAATCTCTACCGAAGTACCAATTGATGTTAACAGAGACGAAATACCCCCAGTGAAAGTGATGCAGACAGCAGTAGTTGGCACAAATGGGTCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCTCTTATTGTGCAGAAATTGAAGATTTGGGTCCAAATGATTCCAGAAAATTTAGGCTAGTACTTCCAGGCCAGCCTGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAGGGAAAATATCGCCTCTATGAACCAGGATTTAACAACATATCCCTGCCCTTTGTGCTTTCTTTTAGATTTGGCAAGACCTCTGATTCTTCCAAGGGTCCTCTCCTAAATGCAATGGAGATAAATAAATATTTGGAGAAAAATGATGGCTCTATTGATTTAGCAGCTGTTTCTAGTGTATTGTCACACTACCCTTCGGCAGATTGGGCACAAGAGGGAGGGGACCCTTGTCTACCTGTTCCATGGTCATGGATCCGCTGTAATTCAGATCCACAACCAAAAGTAGTTTCAGTCTTATTGTCCGGTAAAAACCTGACTGGAAATGTTCCTTTGGATATCACCAAATTGACTGGTCTAGTTGAACTATGGCTTGATGGAAACATGTTAACTGGCCCAATACCAGATTTTACTGGGTGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGTCCTCCCAACATCTCTGCTGAACCTTCCAAATTTAGGAGAAATGTATGTGCAAAATAATTTGTTATCTGGAACAATACCATCTGCTCTTCTGAGCAAAGATTTGGTTTTAGACTACTCTGGAAACATTAATCTTCACAGGGGGAAAAGAATAGAGGGCAAAACGTATGTTATTATCGGTTCCACAGTGGGGGCTTCTGTTCTACTATTGGCCACTATTATATCTTACTTGTTTATGCGTAAAGGAAATAGAAGGTATTTTGAGCAAGATCACAACTCTTCTCTCCCTACTCAAAAGCTGGCTTCCTGGAAAAATGATGATGCTGCAGAAACTGCTCACTGCTTCAGTTTTTCCGAAATTTTAAATGCCACAAATAATTTTGAGAAAAAGATTGGTTCTGGTGGTTTTGGAGTTGTGTACTACGGGAAACTGAAAGATGGAAAAGAGATAGCTGTAAAAGTTTTGACCAATAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACACTTCTTTCAAGAATACATCACAGAAATTTGGTACAGCTTCTTGGGTATTGCCGGGAGGAAGATAGTAGCATGCTCGTTTATGAATTCATGCACAATGGAACTCTCAAGGAACATCTCTATGGTCCATTAACGCATGGACGGAGTATCAATTGGATTAAGCGGCTTGAGGTTGCAGAAGATGCTGCAAAAGGGATTGAATACCTTCATACGGGTTGTATTCCTGTCGTTATCCATAGAGATGTAAAAAGCAGCAATATTCTTCTTGACAAGCAAATGAGAGCTAAGGTCTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGAGTTTCCCATGTTTCTAGCATAGTTCGGGGGACAGTAGGATATCTTGATCCTGAGTACTATATCTCCCAGCAGCTGACTGACAAGAGCGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGACAAGAAGCAATATCAAATGAAAACTTTGGTGTTAACTGCCGAAACATAGTCCAGTGGGCAAAATTTCACATTGAGAGTGGTGACATACAAGGAATTATTGACCCCATGCTAAGGAATGATTACGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGATATATGAGGCCATCGATTTCTGAAGTTCTGAAGGAGATCCAAGATGCAATAGCTATTGAGAGAGAGGCTGAAAGCAATTCACGTGGCTTGTCAAGAAATTCTTTCCACTCTTCCGTGAACATAGGTTCAATGGATCTAGGTGCCACTGAGAGTTACCTCTCAATTGATGAATCCATTGCACGCCCAACCGCAAGATAA 2772 0.4123 MEENGALFLFSLSLLLLPLSSSSAQMQGFVSLDCGGSENFTDEIGLKWSPDDKLPYGEVSTISVANETRRQYTTLRHFPADTKKYCYTLDVVSRTRYLLRAAFLYGNFDNNNVYPKFDISVGATHWSTIVISDANLIEMRELIFLASSSAVSVCLSNATTGQPFISTLELRQFNGSVYYTQYEEQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANFLVDVADGTKKISTEVPIDVNRDEIPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFSYCAEIEDLGPNDSRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFNNISLPFVLSFRFGKTSDSSKGPLLNAMEINKYLEKNDGSIDLAAVSSVLSHYPSADWAQEGGDPCLPVPWSWIRCNSDPQPKVVSVLLSGKNLTGNVPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQLTGVLPTSLLNLPNLGEMYVQNNLLSGTIPSALLSKDLVLDYSGNINLHRGKRIEGKTYVIIGSTVGASVLLLATIISYLFMRKGNRRYFEQDHNSSLPTQKLASWKNDDAAETAHCFSFSEILNATNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDSSMLVYEFMHNGTLKEHLYGPLTHGRSINWIKRLEVAEDAAKGIEYLHTGCIPVVIHRDVKSSNILLDKQMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNENFGVNCRNIVQWAKFHIESGDIQGIIDPMLRNDYDLQSMWKIAEKALMCVQPHGYMRPSISEVLKEIQDAIAIEREAESNSRGLSRNSFHSSVNIGSMDLGATESYLSIDESIARPTAR* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1115 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Amo06g1115 923 SUPERFAMILY Protein kinase-like (PK-like) 585 874 IPR011009 -
Amo06g1115 923 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Amo06g1115 923 Gene3D Ribonuclease Inhibitor 374 524 IPR032675 -
Amo06g1115 923 Gene3D Transferase(Phosphotransferase) domain 1 675 895 - -
Amo06g1115 923 PANTHER TYROSINE KINASE DOMAIN PROTEIN 13 923 - -
Amo06g1115 923 SMART serkin_6 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1115 923 Gene3D Phosphorylase Kinase; domain 1 573 674 - -
Amo06g1115 923 PANTHER OS07G0107800 PROTEIN-RELATED 13 923 - -
Amo06g1115 923 ProSiteProfiles Protein kinase domain profile. 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1115 923 Pfam Malectin-like domain 32 362 IPR024788 -
Amo06g1115 923 Pfam Protein tyrosine and serine/threonine kinase 601 801 IPR001245 GO:0004672|GO:0006468
Amo06g1115 923 SUPERFAMILY L domain-like 400 506 - -
Amo06g1115 923 CDD STKc_IRAK 605 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1115 Amo-Chr6 17498120 17505151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1115 19 709 Receptor kinase-like Gene Family AT2G37050 67.765 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo06g1115 Malectin_like 9e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1115 - - gmx:100784017 1616.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g1115 06 17498120 17505151 Amo12g1172 12 36611256 36616101 PCT
Amo12g1172 12 36611256 36616101 Amo06g1115 06 17498120 17505151 PCT