Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1110 ATGCACATAATAGGGGAAGAATCGCAGCCGCAGCAGAGGTGTGGATATGGAAACTCCTCCACCGATCCATTTGGTTTACTTTATATACTCGATGTTTATTTCCCTCAGCAACTGTTCACTGTCCAAGATTCGTGGCTCAACCTCACTTCTGCTCTTCTCTCCTACTTCTCTTCTTCCTCCGGCCAAAGCCTGGCTTCTCAGGTGAAAAATGATTATGGAAACTTTGTCCTGTCAGTAGACTTTCAGCAACTCAAACAAATATGCCATGTTGAGGAATTTTATGCAATGTTGGGGGAGAAACCTAAAATTGCTATCTTATGCATGAGTGCCGCACTTCACAAGGTTTTGCTTTCCAACTTGGAGAATGACAAGCCGGAGCTTGATGCAAAAGTAGATATCCGTCTTCATAACTGCCCTGAAACTATGATTGCTCTAAAGAACTTAAAAGCAGCTTTCATTGACAAGCTTGTCTCAGTTCGTGGTACTGCTGTGAAAGTCAGCACTGTCAGGCCTCTTGTAGTAGAGCTGACTTTCAAATGTAGTAAATGTAAACAAAGTATTACGCGTATATTTCCGGACGGCAAATTTTCACCTCCATCAACTTGTAATTTGCATGGTTGCAAGAGCAAAATCTTTATTCCATTGCGATCTACTGCTCAAACTATTGATTTTCAAAAAATAAGAGTTCAAGAGATATTAAAACCTGAAGATCATGAAGAAGGGCGAGTGCCTCGAACAGTGGAATGTGAGCTTACTCAAGATCTTGTAGATGCATGCATACCTGGTGATGTGGTGACTGTTACCGGAATTATAAGAGGAATTAACACTTATATGGATATTGGAGGAGGGAAGTCAAAGAACAGAAGCCAGGGGTTTTACTACTTATATCTGGAAGCTGTATCTGTAAAAAATTCGAAGTCACAGTCCACTCCTGGAGATTCGCAAGAAGCTAATCCCAAAGCTAGACCATCTGAGCTGTTGGATCTGTTTTCATTTTCTTCAAGGGATTTAGAATTTGTAGTGAAGTTTGTGGAGGAACATGGTTCAGATTTGTTTCGTCAAATCCTTCAATCTATATGCCCATCCATCTATGGCCATGAGCTTGTTAAAGCCGGGATAACTCTTGCATTATTTGGTGGTGTGCGAAAGCATTCTATGGATCCAAATAAGGTTCCTGTGAGGGGGGACATTCATGTTATAATTGTTGGTGATCCTGGTCTTGGTAAAAGCCAATTGCTACAAGCAGCAGCAGCAGTTTCTCCACGTGGCATTTATGTATGTGCCATGGTTCTGGCTGATAGTGGATTGTGCTGTATTGATGAATTTGATAAAATGTCATCAGAACATCAGGCTTTACTAGAGGCAATGGAGCAACAATGTGTTTCCATTGCAAAGGCTGGTCTAGTAGCAAGTTTATCATCCCGAACTTCTGTCCTGGCAGCTGCAAACCCCGTTGGTGGTCATTATAACCGGGCGAAAACTGTTAATGAAAATTTGAAAATGAGTGCTGCTCTCCTGTCACGTTTTGATTTGATTTTCATACTGTTAGACAAACCTGATGAGCTTCTAGACAAGCGACTCTCCGAGCACATTATGTCCCTACATGCTGGGACTGGACAACATTCACTGGCATTGAAAAAGCGACGTGGAGATCCGCTCCCTGAGTCCAGAACTGTTGTATCGCAGAATGGTGAAAGTGGTGTAAATTTGGGTGTTAGATCTGGTTCTTTGGTTTCAAGGCTGAGACTTGATCCACAAAGAGACAGAGATTTTGTTCCATTACCCAGTCAACTTCTTCGTAAATACATTGCCTATGCAAGGAGTTTTGTATTTCCTAGGATGTCCAAGCCAGCAGCAGATATCTTGCAAAAGTTTTACCTTAAACTTAGAGATCATAATACTTCGGCTGATGGCACTCCTATAACAGCAAGGCAACTGGAAAGTCTGGTAAGGTTGGCTGAAGCTCGAGCTCGGGTGGAATTGAGGGAAGAAATAACAGCCCAAGATGCACTGGATGTTGTGGAAATTATGAAGGAATCTCTGTATGATAAATATGTTGATGAGCATGGTATTGTTGATTTCGGTCGAAGTGGGGGAATGAGTCAACAAAAGGAGGCAAAACGCTTTCTAAATGCTCTCAATAAGCAATCTGAACTAGAACAAAAAGATTGTTTTTCAATATCAGAAATATATAACCTTGCAGATAGGATTTCCTTGAAAGTTCCAGATATTGACACTTTCATTGATAATTTAAACAGTGTTGGTTATCTTCTCAAAAAAGGACCAAAAACATACCAGGTATGGTGGTGCTATCCTCTTCGTATAGTCGAAGCCAATCATTTAGGACTAGGGGCTAACCCGAATTTGAGCAGTAATTTTTGTGTTATGCTGAATTTTGGGCTGTGTGCTGCATTATCACAGTATGGCATGCCATGA 2436 0.413 MHIIGEESQPQQRCGYGNSSTDPFGLLYILDVYFPQQLFTVQDSWLNLTSALLSYFSSSSGQSLASQVKNDYGNFVLSVDFQQLKQICHVEEFYAMLGEKPKIAILCMSAALHKVLLSNLENDKPELDAKVDIRLHNCPETMIALKNLKAAFIDKLVSVRGTAVKVSTVRPLVVELTFKCSKCKQSITRIFPDGKFSPPSTCNLHGCKSKIFIPLRSTAQTIDFQKIRVQEILKPEDHEEGRVPRTVECELTQDLVDACIPGDVVTVTGIIRGINTYMDIGGGKSKNRSQGFYYLYLEAVSVKNSKSQSTPGDSQEANPKARPSELLDLFSFSSRDLEFVVKFVEEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDPNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSEHIMSLHAGTGQHSLALKKRRGDPLPESRTVVSQNGESGVNLGVRSGSLVSRLRLDPQRDRDFVPLPSQLLRKYIAYARSFVFPRMSKPAADILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARVELREEITAQDALDVVEIMKESLYDKYVDEHGIVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSISEIYNLADRISLKVPDIDTFIDNLNSVGYLLKKGPKTYQVWWCYPLRIVEANHLGLGANPNLSSNFCVMLNFGLCAALSQYGMP* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1110 811 Coils Coil 439 459 - -
Amo06g1110 811 Pfam MCM OB domain 145 273 IPR033762 -
Amo06g1110 811 SUPERFAMILY Nucleic acid-binding proteins 71 275 IPR012340 -
Amo06g1110 811 Gene3D - 172 222 - -
Amo06g1110 811 Pfam MCM AAA-lid domain 598 681 IPR041562 -
Amo06g1110 811 CDD MCM8 355 680 - -
Amo06g1110 811 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 428 767 IPR031327 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 SMART mcm 141 682 IPR031327 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 ProSiteProfiles MCM family domain profile. 351 531 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 Gene3D - 145 274 IPR012340 -
Amo06g1110 811 PRINTS Mini-chromosome maintenance (MCM) protein family signature 394 409 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 PRINTS Mini-chromosome maintenance (MCM) protein family signature 505 513 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 PRINTS Mini-chromosome maintenance (MCM) protein family signature 478 490 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 PRINTS Mini-chromosome maintenance (MCM) protein family signature 454 467 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 23 428 IPR031327 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 PANTHER DNA HELICASE MCM8 428 767 - -
Amo06g1110 811 PANTHER DNA HELICASE MCM8 23 428 - -
Amo06g1110 811 SMART AAA_5 395 520 IPR003593 -
Amo06g1110 811 Gene3D - 329 690 IPR027417 -
Amo06g1110 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 687 IPR027417 -
Amo06g1110 811 Pfam MCM P-loop domain 428 535 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo06g1110 811 Pfam MCM P-loop domain 349 427 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1110 Amo-Chr6 17413692 17419978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1110 18 767 Core DNA Replication Machinery Family AT3G09660 68.036 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1110 K10737 - gmx:100784549 1237.25