Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1098 ATGGATGTTGACTCGGAACCACTCAGTTCACAAGACAACGTCAAAGATTGCATGATAACTGGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGCAGTGGCAGCAGTAGTAAGTGTGTGTCTGTGACGACCGATGATATTATAAACCAGACTTTTGAAACATCGGATGCAGCTTATAAGTTGTATGTACATTATGCAAGGTGTCTCAGGTTTGGAGTTCGCAAGGGTGATACAGCACGTGGAAAAGATGGAACACAACGCAGAAGGAGTTCGAGTAGGAAGAGGGAGCATAGAGCGCTGACTCGCACTAGTTGTAAAGTCATGCTTGTAGTGTATTTTGACACCAAAACTTTGACTTGGAGGGTTAAAAAATTAGTCAAGAAGCACAACCACGATCTTGTCCCACAATGCTTGGTACACCTAATTCCAAACCACCGAGGGTTGACTGAGCCACAAAAAGCTCAG 465 0.4366 MDVDSEPLSSQDNVKDCMITGVEENVNCTCDCSGSSSKCVSVTTDDIINQTFETSDAAYKLYVHYARCLRFGVRKGDTARGKDGTQRRRSSSRKREHRALTRTSCKVMLVVYFDTKTLTWRVKKLVKKHNHDLVPQCLVHLIPNHRGLTEPQKAQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1098 155 MobiDBLite consensus disorder prediction 77 97 - -
Amo06g1098 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 147 - -
Amo06g1098 155 Pfam FAR1 DNA-binding domain 82 135 IPR004330 -
Amo06g1098 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 28 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1098 Amo-Chr6 17048580 17049092 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g1098 FAR1 5.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1098 - - ahf:112715498 273.863