Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1086 ATGGCAACAGTAGCTGTGCAAGAAATTCGACCTCCCACTCTGTCTGCAACCTCAGACCCACCACCTATCTTTGATGGAACTACCAGGTTGTACATCAGTTATTCATGCCCTTTTGCGCAGCGCGTATGGATCACTAGGAACTACAAGGGATTACAAGAAAAGATCAAATTAGTTCCTATTGACCTTCAGAACAAGCCTGCTTGGTATAAAGAGAAGGTCCACCCAGAAGGCAAGGTGCCATCTCTTGAACATGACGGCAAGATTTTGGTAGAGAGTATTGACTTGATCAAATACATAGATGTCAATTTCGAAGGACCATCTCTATATCCTAATGATCCTACCAAGAAGGAATTTGGTGAWWAGCTAATTAAGTATGTCGATATTTTTACCAAAGAGATGTTTGGATCATTCAAAGGCGACCCTGTAACGCAAACAAGTGCTACATATGACTACCTGGAGAATGCTCTTGGTAAATATGAAGATGGCCCATTTTTCCTTGGTGAATTTAGCTTGGTGGACATTGCCTATATCACATTTGTTGAGAGGTTCCAACTTGTGTCATCAGAGATTTACAAGCATGACATCACTGCTGGAAGGCCTAAACTAGCTACATGGATTGAGGAGGTAAACAAGAATAACGCATATAAGCAGACAAAACCTGAAAATCCACAAGAGTTCGTTGACTTTGTCAAGAAGCGTTTCTTGGGGCAGTAG 714 0.416 MATVAVQEIRPPTLSATSDPPPIFDGTTRLYISYSCPFAQRVWITRNYKGLQEKIKLVPIDLQNKPAWYKEKVHPEGKVPSLEHDGKILVESIDLIKYIDVNFEGPSLYPNDPTKKEFGXXLIKYVDIFTKEMFGSFKGDPVTQTSATYDYLENALGKYEDGPFFLGEFSLVDIAYITFVERFQLVSSEIYKHDITAGRPKLATWIEEVNKNNAYKQTKPENPQEFVDFVKKRFLGQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1086 237 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Amo06g1086 237 SUPERFAMILY GST C-terminal domain-like 103 234 IPR036282 -
Amo06g1086 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Amo06g1086 237 SFLD Glutathione Transferase (cytosolic) 29 211 IPR040079 -
Amo06g1086 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 237 IPR044629 GO:0004364
Amo06g1086 237 Gene3D - 105 237 - -
Amo06g1086 237 SFLD Main (cytGST) 29 211 - -
Amo06g1086 237 Gene3D Glutaredoxin 1 104 - -
Amo06g1086 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Amo06g1086 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Amo06g1086 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1086 Amo-Chr6 16712230 16714796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1086 8 235 Glutathione S-transferase Gene Family AT5G02790 67.544 1.98e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1086 K00799 - gmx:100793025 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1723 16 34642955 34645589 Amo06g1086 06 16712230 16714796 hybridization
Amo06g1086 06 16712230 16714796 Amo12g2727 12 112779966 112783260 PCT
Amo12g2727 12 112779966 112783260 Amo06g1086 06 16712230 16714796 PCT