Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1072 ATGGAACTGCTGGAGAAAGTAATTGTTTATCCCGAGCAATCCACTCTCAATAAGCGAATTTTCTTGTCCAATATTGACTTATATCTTGTTGTTTACCAAGACAATATCTTCTTCTTTGATCCTCCAAGTAGCAAAATGAGTTTTTCTAAAATTTTCAACAAATTATGCAATGCATTTAGTAAATTGCTTGTGCATTATGACTTTATGGCTGGTCGACTTGTGCAAAGTTTGGAGGACAGTCATCGGTTTGAAATAGACTGTAATGATGCTGGTATTGTGGTTATTGCTGCAAGAATTGATAGAAAGTTGAGTGAATTTGGTGATATTTTTGCACCTAATCAAAATTTAGAGGAATTTGCTATATTTCTCCAAGGAGAACAGGAAGAAGAAATCGACTTGAAAGAAAAACCCCTTTTATCGGTACAGCTGACACAATTTGCTTGCGAAAGTTTGACACTAACTACTCACTACAACCATTGCACACTAGACGGTTTAGCAGTAAGAGATTTTGGGGCAAACTTGGCTGCATTAACACGTGGTGATCCCCTAATCATAGTTCCTTTTGCAGATAGGACATTGCTAAGAGCAAGAAACCCACCAAAGATTAGTTATCCACATTTTGAATATGGAAAAGCTACAAACATTGAAAACTTGTTTAGTGTTCGTGGAATAAGTGGTGGCATTAATGTAAGACAAAATGTGATACAAAACCAAATTCAGATTCTTTATTTGTCTCCACAGCAAATTGCCAGCTTTAAAATGAAAGCTATTAACGATTGTAACTTAAAGAACGTGACTACTTTTCATGTTGTTGCCGGTAAAATATGGAAGGCAAGAACTATTGCGACAAAGATGTTAGATGATAAAGTGACGACAATGTTATTTCCTGTGGATGTTAGGAAAAGAGTTTTTCCAGAACTTCCATATGGCTTTGCAGGCAATGCTTTGGTTCCTGGATTTGCAAGAGCAACTGTGAAGGAGCTCACAGAATTAGAGGATGCTTATCATATCAGAAAAGTACAAGAAGGAATTGAAAGATTGGATGACGAGTATATTAAGTCAAGCATAGATTGGTTAGAATTGAACAAAGGAGTACCTTGTAGGGAAGATAGTTTCTCATTGGTTTCAGGGTTGAGATTGGGGCTTGAGGACCAACATTTTGCATGGGGTAAATTAAAATGTTCAACACCACTTACTGTTAAGTCAGGTCTAGTCATGCTATTACCAGCAGCACCAGATGATGGAGGTCTTAATGTTTGTTTGGATTTACCAGAAGATCAAATGTACATATTTCGTAGGATAATGCTAGAATTCTAA 1317 0.366 MELLEKVIVYPEQSTLNKRIFLSNIDLYLVVYQDNIFFFDPPSSKMSFSKIFNKLCNAFSKLLVHYDFMAGRLVQSLEDSHRFEIDCNDAGIVVIAARIDRKLSEFGDIFAPNQNLEEFAIFLQGEQEEEIDLKEKPLLSVQLTQFACESLTLTTHYNHCTLDGLAVRDFGANLAALTRGDPLIIVPFADRTLLRARNPPKISYPHFEYGKATNIENLFSVRGISGGINVRQNVIQNQIQILYLSPQQIASFKMKAINDCNLKNVTTFHVVAGKIWKARTIATKMLDDKVTTMLFPVDVRKRVFPELPYGFAGNALVPGFARATVKELTELEDAYHIRKVQEGIERLDDEYIKSSIDWLELNKGVPCREDSFSLVSGLRLGLEDQHFAWGKLKCSTPLTVKSGLVMLLPAAPDDGGLNVCLDLPEDQMYIFRRIMLEF* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1072 438 Gene3D - 235 438 IPR023213 -
Amo06g1072 438 Gene3D - 1 211 IPR023213 -
Amo06g1072 438 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 2 436 - -
Amo06g1072 438 Pfam Transferase family 2 432 - -
Amo06g1072 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1072 Amo-Chr6 16260111 16262711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1072 1 437 Monolignol Biosynthesis Gene Families AT5G48930 28.859 1.06e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1072 K15400 - gmx:100801822 613.224