Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1051 ATGTCTGACCCAACAACACAACCAACTATGCTCCCTTTCTTCAACCAATCCATGGAACTCGTCCAACTCCCCAACCCAACCGCAACCCGAATCCGAAGCCGAACCGGTTTCTCCCCCACCCTCGGCGAGCTCCTCAAACACGTAGAAGATGCTCAAAACGACAACCCTAACGCACCAACACAACATGTTCTCGATCTCAATTCTACTCCTAACTCCTCTCACCCTTTTGTTCTCTCCTTCGCCAACTTAACCTACAGTGTTAAGGTCCGTCGCAAGATGATCCTGTCTCCATGCTTCACCTCAAACCATGACTTGCTGCCGGAGAACGACGCAACGGACGCAAAAACCGATAACGCCGCCACCAAGATTCTCCTAAATGATATCTCCGGTGAGGCGAGGGACGGCGAGATCATGGCGGTACTCGGAGCCAGTGGCTCCGGAAAGTCTACCTTGATCGACGCCCTTGCAGACCGGATCTCCAAGGAGAGCCTCAAGGGAAGTATAACGCTAAACGGAGACGTTTTGGAGTCCAGGATGTTGAAGGTTATCTCCGCTTACGTCATGCAGGACGACCTCCTCTTCCCCATGCTCACCGTGGAGGAAACCCTAATGTTCTCCGCCGAGTTCCGCCTCCCTCGCTCCCTATCCAGGTCCAAGAAGAAGGCTCGCGTTCACGCCCTCATCGACCAGCTCGGCCTCCGCAACGCCGCCACCACCGTCATCGGCGATGAAGGCCACCGCGGYGTCTCCGGAGGTGAGCGCCGACGCGTCTCCATCGGGATAGACATTATCCACGATCCGATYGTCCTCTTCCTCGACGAGCCAACCTCCGGCCTTGACTCCACCAGCGCCTTCATGGTAGTGAAGGTGCTTCAGCGAATCGCACAGAGCGGGAGCATCGTAATCATGTCAATCCACCAACCAAGCTACCGCATCCTCGGCCTCCTCGACCGCCTGATCTTCCTGTCCCACGGCCAAACCGTATTCAGCGGCTCTCCAGCGARCCTCCCGCCGTTCTTCTCAGAGTTCGGCCACCCCATACCGGAGAACGAGAACCGCACGGAGTTCGCTCTTGACTTAATCCGCGAGCTGGAAGAAGCTCCCGGCGGCACAAAAGGCCTCGTGGACTTCAATAAACAGTGGCAACTCAAGAACAAGAGAATTTCCGAGAAAACCATAAGCGGAATACCGAAAGTGTCCCTGAAGGACGCAATCAGCGCAAGCATTTCCAGGGGTAAACTCGTCTCAGGGGCGCCAGCTGGCACCAGTACCAGTAACGACTCCAMCCAACTCGCAGCRGCATCATCAGTCCACAMGTTCGYGAATCCAYTCTGGATCGAGATGGCGGTTATAGCAAAACGGTCTCTAACAAACTCACGGAGGATGCCCGAATTATTCGGGATCCGCTTGGGTGCAGTACTAGTGACTGGTGCCATCCTCGCCACCATGTTTTACCACCTCGATAACTCTCCCAAGGGCGTTCAGGAGCGGTTAGGGTTCTTCGCATTCGCTATGTCCACCACCTTCTACACCTGCGCTGAAGCCATCCCCGTCTTCCTCCAAGAACGCTACATCTTTATGAGAGAAACTGCCTACAACGCCTACCGCCGCTCGTCCTACGTCCTCGCTCACTCCATCATCTCCGTCCCTTCTTTAGTCTTCCTCTCCTTCGCCTTTGCCGCCACCACCTTCTGGGCGGTGGGACTCGCCGGCGGCACCAGTGGCTTCCTCTTCTACTTCCTCACCATTGTGGCCAGCTTCTGGGCGGGGAGCTCCTTCGTGACGTTCCTCTCCGGCGTGGTGTCTCACGTGATGCTTGGCTTCACGGTGGTGGTTGCAATTCTAGCGTACTTTTTACTCTTCAGTGGATTCTTCATCAGCAGGGACAGAATCCCACCGTACTGGATATGGTTTCACTACATATCTCTGGTGAAGTACCCGTACGAGGGAGTGTTGCAGAACGAGTTCGATCTGAATCCRCCAAGATGCTTTGTTAGAGGGACGCAGATGTTCGACAGYACGCCGCTGATGGAGGTGCCGGAGGCGTTGAAAGTGGAGCTGCTGAAGAGTATGAGCAAGACGCTGGGGATTAACATCACGAGTTCCACGTGCGTGATTACCGGAGCAGATGTGCTGAAGCAGCAGGGTGTGACGCAGCTGAGCAAGTGGAACTGCCTTTGGATAACGCTCGCTTGGGGTTTCTTCTTCCGTTTCCTTTTCTATTTGACTCTTCTTTTTGGAAGCAAGAATAGGAGAAGGTAA 2262 0.5464 MSDPTTQPTMLPFFNQSMELVQLPNPTATRIRSRTGFSPTLGELLKHVEDAQNDNPNAPTQHVLDLNSTPNSSHPFVLSFANLTYSVKVRRKMILSPCFTSNHDLLPENDATDAKTDNAATKILLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLKGSITLNGDVLESRMLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSRSKKKARVHALIDQLGLRNAATTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSHGQTVFSGSPAXLPPFFSEFGHPIPENENRTEFALDLIRELEEAPGGTKGLVDFNKQWQLKNKRISEKTISGIPKVSLKDAISASISRGKLVSGAPAGTSTSNDSXQLAAASSVHXFXNPXWIEMAVIAKRSLTNSRRMPELFGIRLGAVLVTGAILATMFYHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISVPSLVFLSFAFAATTFWAVGLAGGTSGFLFYFLTIVASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYISLVKYPYEGVLQNEFDLNPPRCFVRGTQMFDSTPLMEVPEALKVELLKSMSKTLGINITSSTCVITGADVLKQQGVTQLSKWNCLWITLAWGFFFRFLFYLTLLFGSKNRRR* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1051 753 Pfam ABC transporter 125 277 IPR003439 GO:0005524
Amo06g1051 753 ProSitePatterns ABC transporters family signature. 249 263 IPR017871 GO:0005524
Amo06g1051 753 MobiDBLite consensus disorder prediction 49 68 - -
Amo06g1051 753 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 349 IPR003439 GO:0005524
Amo06g1051 753 SMART AAA_5 134 349 IPR003593 -
Amo06g1051 753 MobiDBLite consensus disorder prediction 53 68 - -
Amo06g1051 753 Pfam ABC-2 type transporter 450 656 IPR013525 GO:0016020|GO:0140359
Amo06g1051 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 339 IPR027417 -
Amo06g1051 753 Pfam ABC-2 type transporter 306 368 IPR043926 GO:0140359
Amo06g1051 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 36 746 - -
Amo06g1051 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 746 - -
Amo06g1051 753 Gene3D - 114 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1051 Amo-Chr6 15642041 15644753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1051 124 309 Calmodulin-binding Proteins AT2G36910 30.159 5.37e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1051 K05681 - gmx:100781319 1131.32