Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1041 ATGGGGAAGGGAGGCCAAGATTATGGGAGGCAAGAGAAGAAGAGTTCTGATGATTCTTCGGATCGCGACACGTTCAAGGCGTGGGCTAAGGACGTTCGAGAGTGCGAGGAACACTTCAAGGTGAGCGTGAAAACTGGATTAAGCAGTGAAGAAGTTGAGAATCGGAGACGGATCTATGGTTCCAACGAGCTCGAGAAGCACGAGGGTCAATCCATCTGGAGTTTGATCTTGGAGCAGTTCAACGACACCTTGGTTCGGATCCTCCTCGGCGCCGCCATCATTTCCTTCGTGCTCGCCTGGTACGACGGCGAGCATAGCGGCGAGAAGGATATCACGGCCTTCGTGGAGCCCCTGGTGATCTTCTTGATTCTGATTGTGAACGCCGTGGTTGGGGTTTGGCAAGAGAGCAATGCGGAGAAGGCTCTAGAAGCCTTGAAGGAGATCCAATCGGAGCACGCCTCTGTCATCCGTGACAACAAGAAAATCGCTAGCTTGCCGGCGAGGGATCTTGTTCCCGGTGATATTGTGGAGCTTAAAGTTGGGGATAAGGTTCCCGCGGATATGAGGGTTGTTGAATTGATCAGTTCCACTTTAAGGTTGGAGCAGGGATCTTTGACCGGTGAGAGTGAAGCAGTGAACAAGAGCAACAAGCCTGTGGCTGAGGATGCCGATATCCAAGGTAAGAGGTGCATGGTTTTTGCCGGGACGACTGTTGTTAATGGGAATTGCATCTGCTTGGTTACTCAGATTGGAATGGAGACTGAGATTGGGAAGGTGCATCAGCAGATACACGTGGCCTCGCAGAGTGAGGAGGATACTCCCTTGAAGAAGAAGCTCAATGAATTTGGAGAGACGCTGACTATGATAATTGGGTTAATTTGTATTCTTGTTTGGCTCATCAATGTTAAGTACTTCCTTTCCTGGGAATATGTGGATGGGTGGCCCAAGAATTTCAAGTTCTCATTTGAGAAGTGTACGTATTACTTTGAGATTGCTGTGGCATTGGCTGTTGCTGCTATTCCGGAGGGTTTGCCTGCGGTCATCACAACTTGTCTGGCTTTGGGCACTCGCAAGATGGCGCAGAAGAATGCCTTGGTTCGGAAGCTACCTAGTGTGGAAACTCTGGGTTGTACAACTGTGATTTGTTCGGATAAGACTGGTACATTGACCACTAACCAGATGTCAGTGACCAAACTGGTAGCTATTGGCCATAATGTAGACACGTTGCGAGCATTCAAAGTGGATGGAACTACGTACAATCCAGCAGGTGGTAAAATAGAGAACTGGCCAGCTGGTGATATGGATGCTAATCTTCAGACGATAGCGAAAATAGCCGCCATCTGCAATGATGCTGGTGTCACACAGTCGGATCATAAATTTGTCGCTCACGGAATGCCTACAGAAGCGGCCTTGAAGGTTCTGGTAGAGAAGATGGGCCTTCCTAAAGGATCAAAGGATGTAAACTCAGCAAGTACGAGTAGCTTACTACGTTGTTGTGAATGGTGGTCTCAACGTGAACGGCGGATTGCTACCCTCGAGTTTGACCGTGATAGAAAATCAATGGGTGTCATTGTAGACTCTAATGAACGGAAAAAGTCGCTTCTGGTTAAGGGTGCAGTGGAAAATGTGTTGGAAAGAAGCACTAAAATTCAGTTGCGTGACGGTTCTGTTGTGAAACTGGATGCTAATGCTAGGAAGCTTGTATTGCAAGCTCTACATGAAATGTCAACTAGTGCTTTACGTTGTTTGGGATTTGCATACAAAGATGAGCTACCTGATTTTGCAACCTACAGTGGTAATGACGATCATCCAGCTCACCAGCTCTTGCTTAATCCTTCCAACTATCCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGTTGGGTTGAGGGATCCACCTAGGGAAGAGGTGCACCAAGCCATCGAAGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATTACTGGAGACAACAAGAACACTGCAGAAGCTATATGCCGTGAAATAGGTGTATTTAAATCCAATGAAGAACTTACTTCAAAAAGTTTAACTGGGAAAGATTTTATGGAACTGCGCGATAAGAAAGCTCATCTGAGACAGGCTGGTGGGCTTTTGTTTTCAAGGGCTGAACCCAGGCACAAGCAAGAAATTGTGAGGCTGCTCAAAGAGGACGGTGAGGTGGTGGCCATGACTGGAGATGGTGTTAACGATGCACCTGCATTGAAGCTTGCTGACATTGGCGTTGCTATGGGTATTACAGGAACAGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTGGCAGATGACAACTTTAGTACCATTGTTGCTGCTGTTGGAGAGGGTAGATCAATCTACAATAACATGAAGGCTTTTATCAGGTACATGATCTCTTCCAATATGGGAGAGGTTGCGTCTATATTTCTAACGGCTGCATTAGGTATTCCTGAAGGACTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTGACCGATGGACCCCCTGCAACAGCTTTGGGATTTAATCCTCCTGATAACGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCACTGATTAACATGTGGATCTTATTCCGCTATCTGGTAATTGGGATGTACGTTGGGATAGCTACAGTTGGTGTCTTCATCATATGGTTTACTTGTGGGTCTTTCATGGGCATCGATCTTTCAGGGGATGGACATACTTTAGTCACTTACTCCCAACTTGCCAATTGGGGTCAATGCCCCACTTGGACCAACTTCACTGCTTCCCCCTTCACGGCTGGTAACCAAGTTGTTACCTTTGATGGGCCCTGTGATTATTTCCGTACTGGCAAGGTGAAAGCTATGACACTATCGCTCTCGGTGTTGGTAGCAATTGAAATGTTCAACTCCCTCAATGCTCTTTCTGAGGATGGAAGCCTTTTGTCAATGCCCCCGTGGGTCAACCCGTGGCTACTCTTGGCAATGTCTGTATCATTTGGTTTGCACTTTTTGATCTTGTACGTGCCATTCTTGGCCAAAGTATTTGGTATTGTGCCCCTGAGCTTGAATGAGTGGCTTTTGGTTTTGGCTGTCGCATTTCCTGTCATTATAATCGATGAGATTCTGAAATTCATTGGGAGGTGTACAAGTTCGTCTCAAACATCAGCCGCAAGGAAATCAAAGCAAAAATCAGAGTAG 3189 0.4666 MGKGGQDYGRQEKKSSDDSSDRDTFKAWAKDVRECEEHFKVSVKTGLSSEEVENRRRIYGSNELEKHEGQSIWSLILEQFNDTLVRILLGAAIISFVLAWYDGEHSGEKDITAFVEPLVIFLILIVNAVVGVWQESNAEKALEALKEIQSEHASVIRDNKKIASLPARDLVPGDIVELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKSNKPVAEDADIQGKRCMVFAGTTVVNGNCICLVTQIGMETEIGKVHQQIHVASQSEEDTPLKKKLNEFGETLTMIIGLICILVWLINVKYFLSWEYVDGWPKNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTKLVAIGHNVDTLRAFKVDGTTYNPAGGKIENWPAGDMDANLQTIAKIAAICNDAGVTQSDHKFVAHGMPTEAALKVLVEKMGLPKGSKDVNSASTSSLLRCCEWWSQRERRIATLEFDRDRKSMGVIVDSNERKKSLLVKGAVENVLERSTKIQLRDGSVVKLDANARKLVLQALHEMSTSALRCLGFAYKDELPDFATYSGNDDHPAHQLLLNPSNYPSIESELIFVGLVGLRDPPREEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFKSNEELTSKSLTGKDFMELRDKKAHLRQAGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNMGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDNDIMKKPPRRSDDSLINMWILFRYLVIGMYVGIATVGVFIIWFTCGSFMGIDLSGDGHTLVTYSQLANWGQCPTWTNFTASPFTAGNQVVTFDGPCDYFRTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLSMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKVFGIVPLSLNEWLLVLAVAFPVIIIDEILKFIGRCTSSSQTSAARKSKQKSE* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1041 1062 SFLD p-type atpase 363 784 IPR044492 -
Amo06g1041 1062 PRINTS P-type cation-transporting ATPase superfamily signature 201 215 - -
Amo06g1041 1062 PRINTS P-type cation-transporting ATPase superfamily signature 382 396 - -
Amo06g1041 1062 PRINTS P-type cation-transporting ATPase superfamily signature 626 637 - -
Amo06g1041 1062 PRINTS P-type cation-transporting ATPase superfamily signature 648 658 - -
Amo06g1041 1062 PRINTS P-type cation-transporting ATPase superfamily signature 732 751 - -
Amo06g1041 1062 PRINTS P-type cation-transporting ATPase superfamily signature 756 768 - -
Amo06g1041 1062 SUPERFAMILY Calcium ATPase, transmembrane domain M 26 1045 IPR023298 -
Amo06g1041 1062 MobiDBLite consensus disorder prediction 1 23 - -
Amo06g1041 1062 SFLD Haloacid Dehalogenase 363 784 - -
Amo06g1041 1062 Pfam Cation transporting ATPase, C-terminus 817 1042 IPR006068 -
Amo06g1041 1062 Gene3D - 379 777 IPR023214 -
Amo06g1041 1062 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1059 - -
Amo06g1041 1062 SUPERFAMILY Calcium ATPase, transduction domain A 151 261 IPR008250 -
Amo06g1041 1062 Gene3D - 45 266 - -
Amo06g1041 1062 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 389 630 IPR023299 GO:0000166
Amo06g1041 1062 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 119 229 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo06g1041 1062 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 706 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo06g1041 1062 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 321 403 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo06g1041 1062 Pfam haloacid dehalogenase-like hydrolase 379 746 - -
Amo06g1041 1062 Pfam Cation transporter/ATPase, N-terminus 28 95 IPR004014 -
Amo06g1041 1062 ProSitePatterns E1-E2 ATPases phosphorylation site. 384 390 IPR018303 -
Amo06g1041 1062 Gene3D - 78 1044 - -
Amo06g1041 1062 Pfam E1-E2 ATPase 148 362 - -
Amo06g1041 1062 Gene3D - 392 633 IPR023299 GO:0000166
Amo06g1041 1062 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1059 - -
Amo06g1041 1062 SUPERFAMILY HAD-like 380 836 IPR036412 -
Amo06g1041 1062 SMART Cation_ATPase_N_a_2 26 100 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1041 Amo-Chr6 15208653 15215698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1041 1 1062 Primary Pumps ATPases(2) AT1G07670 79.041 0.0 1723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1041 K01537 - gmx:100788807 1872.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1708 16 34185495 34192254 Amo06g1041 06 15208653 15215698 hybridization