Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1026 ATGCTGGTAATGCTGTCGTTGCTCTCATGGCTCGTTGATATAAAATCCTTCGAGATGGGAAATAGGTTGAGGAGGATGCTAGTATCCTTTTTTCGGGTTATTGTTGTGGGAATGATAGTGGAGATCATTGTTATGTATCCAATTCAGCATCGAAAATATCGCGCTGGGATAGACAATCTGCTTGTGCTCCTTATCGAGAGAACAAGTGATAATTATAGGCAGCTTTCTTGGGGTGTTTTGGATGATATTATAATGGGTAGACTTGGTGAAAGTACTTTTAAAGATTTGAAAGAAGGCATTATTGGGAAGGATGCCCTTCAACAAGAAAGTCTTATTCCTACTTAA 345 0.3913 MLVMLSLLSWLVDIKSFEMGNRLRRMLVSFFRVIVVGMIVEIIVMYPIQHRKYRAGIDNLLVLLIERTSDNYRQLSWGVLDDIIMGRLGESTFKDLKEGIIGKDALQQESLIPT* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1026 114 PANTHER P-TYPE ATPASE, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 26 66 - -
Amo06g1026 114 PANTHER CALCIUM-TRANSPORTING ATPASE 26 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1026 Amo-Chr6 14536959 14537775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1026 34 65 Primary Pumps ATPases AT5G62670 84.375 2.83e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1026 K01535 - qsu:111992387 59.6918