Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0997 ATGACAACAAGTCTGCATCAGGCATCAATAGCTGAAAGCAATTTGCAAATAATGGAAGCCCGTCCTTCTATATCCATTGAAAGATCAAGTGCGGAGAAACACAATGTCATGGGGATGTCTGGAGCACTATCTTCATCCTTGGCAGTCCTTCCAACACCCCTAGAAGAGACATATAATAAGTTGCCTGATTCACCTCTTGCTTTTGTAGAAGAAGGGCTGATGAGTGGACCTTTAACTCATTCTGGTCATTTAAATAACAACGGAGCAGTTGGACATATCTTTTCATCTTCTCCTGGATATTCAACTGCTCTTCACCATTCATCCCTTTCACCTCATGAAAAGCATTCTAGAAATGCTCACATTATTTCACATTCATCAACTAATATGGCTACATTGCCACCATTTTCTTCAAATAGTGGACCACTACCTTCCAAACCATCAAGCCATTTTCCTAATGAAAACAGTGCCTCCTGGCATACTGATTCTGTGCCAAGCTTTCTGGATTTTCCCGCAAATACTTCCATCGATAGTGGTAGGGTAGAAAGTGGTGCCTGCACTATCATGGCATCTGAGGAATATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTAACTTCTAATTTGAATGATCTTCTTGCTGATAATGTTCCAGATCCTGAGCCAAAGGTTTCAAAACCATCTTTGCAATTACCAGGGCATCCATCCGAAGGCCATCAACAACTTCCTGCTTCATCTGAAGAAAATTGCGCTGGTGCTGCCCCTTCTTCCTCAGCAAAATCTGCTCCTTCCAAGCCACGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTCGTGGATGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGCTTAACTATATATCATGTCAAAAGCCACTTGCAGAAATACAGGACAGCTAGATATAGACCCGACTCGTCTGAAGGAGTCTCAGAGAAAAAAACAAGTTCCATTGAAGAGATGTCATCACTAGATTTGAAAACTGGCATTGATATCACTGAAGCTCTGCGACTGCAAATGGTGGTTCAGAAGCAGTTGCATGAACAACTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGTAAACCCGAGACTGAAATGTTTAAGGCATCATTATCTACTGCTGAAAATCCATCTGGATCCTCTTTGGATGCCATGCAAGATGTTCCAGCCAAAAGCGCATCAATGGTGGACAGTTACAAGCCAGGACCTGATCAAGCTATCGGCAGCACCACAGTTGTGGAAGGCTCAGTGGAAATAAGAGGGAAACATGATTCTCCCAAAACACAACTTTCTGAGAATCCTAAGCAGCATGCTAATGCTAACGACGATGCTGCTCAAGCCTCGAAGCGTCAAAGAAAAGATGAGTAA 1497 0.4302 MTTSLHQASIAESNLQIMEARPSISIERSSAEKHNVMGMSGALSSSLAVLPTPLEETYNKLPDSPLAFVEEGLMSGPLTHSGHLNNNGAVGHIFSSSPGYSTALHHSSLSPHEKHSRNAHIISHSSTNMATLPPFSSNSGPLPSKPSSHFPNENSASWHTDSVPSFLDFPANTSIDSGRVESGACTIMASEEYCKQNDWQEWADQLISDDDTLTSNLNDLLADNVPDPEPKVSKPSLQLPGHPSEGHQQLPASSEENCAGAAPSSSAKSAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGVSEKKTSSIEEMSSLDLKTGIDITEALRLQMVVQKQLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPETEMFKASLSTAENPSGSSLDAMQDVPAKSASMVDSYKPGPDQAIGSTTVVEGSVEIRGKHDSPKTQLSENPKQHANANDDAAQASKRQRKDE* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0997 498 MobiDBLite consensus disorder prediction 131 156 - -
Amo06g0997 498 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 42 495 IPR044848 GO:0003700
Amo06g0997 498 Gene3D - 272 331 - -
Amo06g0997 498 MobiDBLite consensus disorder prediction 218 276 - -
Amo06g0997 498 MobiDBLite consensus disorder prediction 474 488 - -
Amo06g0997 498 Pfam MYB-CC type transfactor, LHEQLE motif 359 404 IPR025756 -
Amo06g0997 498 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 270 330 IPR017930 -
Amo06g0997 498 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 42 495 - -
Amo06g0997 498 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 273 327 IPR006447 GO:0003677
Amo06g0997 498 Pfam Myb-like DNA-binding domain 275 326 IPR001005 -
Amo06g0997 498 MobiDBLite consensus disorder prediction 435 498 - -
Amo06g0997 498 MobiDBLite consensus disorder prediction 247 272 - -
Amo06g0997 498 SUPERFAMILY Homeodomain-like 271 327 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0997 Amo-Chr6 13710036 13713570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0997 18 402 G2-like Transcription Factor Family AT4G28610 49.239 7.99e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo06g0997 Myb_DNA-binding 1.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0997 - - aip:107624999 948.347