Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0987 ATGGAGAAAATGACAGGAGCAGGAGGCGGAGGAGGGGCAACAGTAGTGTTGTCGGCGAAGGAGGCGTTCGAGAAACTGGAGAAGGTTGGAGAAGGGACGTACGGGAAGGTGTACAGAGCGAGGGACAAGGCCACCGGCAAGATCGTGGCCCTCAAGAAGACTCGTCTCCACGAGGACGAAGAGGGCGTCCCTCCCACCACTCTCCGCGAGGTCTCCATCCTACGCATGCTCTCCCGCGATCCCCATGTTGTCAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGCAAGACCGTGCTCTACCTGGTATTCGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAGACTGGTCAATTCATCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTCTGTAAGGGCGTTGCTTTCTGCCACGGACATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGAACAACAATGATGCTCAAAATAGCTGATCTTGGACTCGCTCGTGCTTTTACTGTGCCAATTAAGAAATACACCCACGAGATACTAACCTTGTGGTATAGAGCTCCCGAAGTCCTTCTGGGTGCTACCCATTACTCAATGGCGGTGGATATGTGGTCCGTTGGCTGCATATTTGCTGAACTTGTCGCTAAGCAAGCCCTTTTCCCTGGTGATTCGGAACTGCAACAACTCCTCCACATATTCAGGCTATTGGGTACCCCTAATGAAGAGGTGTGGCCAGGCGTTAGTAAACTAATGAACTGGCATGAGTACCCTCAGTGGACCCCTCAAGAGCTGTACATGGCTGTTCCAACCTTGGATGATCAAGGAGTCGATCTACTATCTCAAATGCTGCAATACGAGCCTTCCAAGCGGATTTCTGCAAAGAAAGCTATGGAACACCCTTACTTCCAGGACCTGGATAAGACCAATCTCTAG 966 0.5062 MEKMTGAGGGGGATVVLSAKEAFEKLEKVGEGTYGKVYRARDKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQFIPPKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRTTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVGCIFAELVAKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWTPQELYMAVPTLDDQGVDLLSQMLQYEPSKRISAKKAMEHPYFQDLDKTNL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0987 321 Gene3D Phosphorylase Kinase; domain 1 18 109 - -
Amo06g0987 321 SUPERFAMILY Protein kinase-like (PK-like) 19 317 IPR011009 -
Amo06g0987 321 PANTHER CELL DIVISION PROTEIN KINASE 17 320 - -
Amo06g0987 321 SMART serkin_6 23 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0987 321 ProSiteProfiles Protein kinase domain profile. 23 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0987 321 Gene3D Transferase(Phosphotransferase) domain 1 111 320 - -
Amo06g0987 321 PANTHER - 17 320 - -
Amo06g0987 321 Pfam Protein kinase domain 23 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0987 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Amo06g0987 321 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0987 Amo-Chr6 13511533 13513147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0987 10 321 Core Cell Cycle Gene Families AT1G20930 84.026 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Amo06g0987 Pkinase 8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0987 K07760 - gmx:547738 584.719