Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0985 ATGCACTTGAGCGAGAACGAAGGGATAGAGGGGAAGGTCTTCGTGGTGACCGGTGGGCTCGGATTCGTAGGGGCAGCTCTTTGCTTGGAGCTGATCCGAAGAGGTGCCGCGGAGGTGCGAGCCTTTGACCTCCGCCACTCATCTCCATTTACCCATGCTCTCGAGAAAAAGGGAGTGCGCTGCATCCAAGGGGATGTTGGGCGCAAAGAAGAGGTGGAAAGAGCCCTGCAGGGGGCGGAGTGTGTGTTCCACCTGGCGGCCTTCGGAATGTCGGGCAAAGAGATGCTCCAGATAGGGCGCGTGGATGAGGTCAACATAAGCGGGACCTGCCACGTGCTCGACGCGTGCCTCGACCTCGGCATCACAAGGCTCGTCTATTGCAGCACTTACAATGTAGTCTTCGGTGGTCAACCCATCGTCAACGGAGATGAGACTCTGCCGTATTTCCCAATTGATCAGCATCTCGTCGATTCATACGGCCGCAGCAAATCCATCGCCGAACAGCTCGTTCTCAAGAATAACGCCCGTCCACTCAAGAATAACTCCGGGAAGCGTCTTTACACCTGCGCTGTTCGTCCTGCTGCAATCTATGGACCCGGCGAAGACAGGCACCTTCCTAGGATCATATCCATGGCCAAGTTGGGTCTCCTTCTCTTCCGGATTGGCCACCACACTGTCAAATCAGATTGGGTTTATGTGGACAACCTTGTTCTTGCTCTCATCTTGGCAAGTATGGGGCTTTTGGATGACATCCCTGGGGAGGGAAAGGGAAAGCTCCCCAACGCGGCTGGCCAAGCATATTTCATATCTGACGGTTCTCCTGTCAATACTTTTGAATTCATCGAACCTCTCGTCAGGAGTTTGGACTACCAGTTCCCAATGAAGTGGTTGGCTGTCGATCGTGCTCTTGTTATTGGGAGGATTTGCTGGGCTGTTTATACAATATTATATCCATGGCTCAATCGGTGGTGGCTTCCTCAGCCATTCATCCTTCCCCCTGAAGTACACAAGGTTGGGGTCACCCATTATTTCTCTTATCTCAAAGCCAGAGAGGAGATCGGTTATGTCCCCATGGTGTCCTCTCGAGAGGGGATGGCTTCTACCATGGCATACTGGCAAGAGAGGAAAAGGACCACATTGGACGGGCCTACCATATACGTGTGGCTGTTTGCAGTCATTGGAATGATCTCTCTCGCCTCTGCTGCTTTCTTACCTGACATTGGAATTGTGGTCTTTCTTAGAGCTATATCGCTTTTTGTCTTTCGATCAATGTGGATGATAAGACTAATTTTCTTTTTAGCTACAGCTTTACATATCCTTGAAGCCATTTATGCTTGGCACCTCGCTAAAAGGGTCGATCCTTCTAATGCAAGAGGCTGGTTTTGGCAAACTTTTGCTCTTGGATTCTTTTCATTGCGTTTCCTCTTGAAAAGAGCAAGGAAGTAA 1446 0.5069 MHLSENEGIEGKVFVVTGGLGFVGAALCLELIRRGAAEVRAFDLRHSSPFTHALEKKGVRCIQGDVGRKEEVERALQGAECVFHLAAFGMSGKEMLQIGRVDEVNISGTCHVLDACLDLGITRLVYCSTYNVVFGGQPIVNGDETLPYFPIDQHLVDSYGRSKSIAEQLVLKNNARPLKNNSGKRLYTCAVRPAAIYGPGEDRHLPRIISMAKLGLLLFRIGHHTVKSDWVYVDNLVLALILASMGLLDDIPGEGKGKLPNAAGQAYFISDGSPVNTFEFIEPLVRSLDYQFPMKWLAVDRALVIGRICWAVYTILYPWLNRWWLPQPFILPPEVHKVGVTHYFSYLKAREEIGYVPMVSSREGMASTMAYWQERKRTTLDGPTIYVWLFAVIGMISLASAAFLPDIGIVVFLRAISLFVFRSMWMIRLIFFLATALHILEAIYAWHLAKRVDPSNARGWFWQTFALGFFSLRFLLKRARK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0985 481 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 380 IPR036291 -
Amo06g0985 481 Pfam Transmembrane protein 254 391 476 IPR028110 -
Amo06g0985 481 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 295 IPR002225 GO:0003854|GO:0006694|GO:0016616
Amo06g0985 481 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 10 364 - -
Amo06g0985 481 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 364 - -
Amo06g0985 481 Gene3D - 3 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0985 Amo-Chr6 13468778 13470867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0985 1 481 Lipid Metabolism Gene Families AT2G33630 67.842 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0985 - - gmx:100808827 796.193