Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0951 ATGGCGGTGAAGAGAGGGGTTGCTTCCGCCGTGGTGTTGTGTGTGTTGGCTTCTGTGAGCGTGAGTCTTGGTGAAGATCCCTACAGGTTCTTCGACTGGAATGTTACCTACGGCGACATTTACCCGCTAGGTGTTCGTCAACAGGGAATACTYATAAACGGCCAATTCCCAGGACCAGACATTCATTCAGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGCTTGGACCAGCCCTTTCTCCTCTCCTGGAACGGGGTCCAACAGAGAAGGAACTCATACGAGGATGGGGTGTTTGGAACAACATGTCCCATCCCACCGGGGAAGAACTTCACTTACATACTTCAAGTGAAGGATCAGATTGGAAGCTTTTACTACTTCCCTTCTCTTGCATTTCACAAAGCTGCGGGCGGCTTCGGAGGCATCAGGATCCTCAGCAGGCCAAGGATCCCGGTCCCTTTCCCTGATCCGGCCGGCGATTACACTGTTCTCATTGGAGACTGGTACAAGGCCAACCACACGGATTTGCAAAGGCAACTTGATAGCGGAAGAAAGCTAGCACTCCCCGATGGAATCCTGATCAATGGTCGCGGGGAGAACGGGGCGTCATTCAACGTGGAACAAGGAAAGAGTTACAGGCTGAGAATATCAAATGTGGGGCTGGAGAATTCCCTGAATTTCCGCATACAGAACCACAAGATGACCCTGGTGGAAGTGGAAGGAACCCACACCCTTCAGACCACATACTCCTCTCTCGATGTCCACGTTGGTCAATCCTACTCCGTCCTAGTCACCGCCGATCAACCTCCCCGGGACTACTACATCGTGGTTTCCACTCGCTTCACCACCACAGTCCTCACCACCACCGGAATTCTTCGCTACAGCAACTCAGCAGGGCCAGTGCAGGGCCCGCCACCTGGGGGACCCACCAYCCAGATTGACTGGTCGTTGAACCAGGCCCGGTCCATCAGGACGAACCTKACAGCAAGTGGRCCAAGGCCCAACCCGCAAGGGTCGTACCACTACGGTCTCATAAACCTGACGAGAACAATCGTGGTGTCGAGCTCAGCCGGGCAGGTGAATGGGAAGCAGAGATACGCCATTAACAGCGTGTCTTACGTTGCACCCGACACTCCTCTCAAGGTGGCCRACTTCTTCAAGATCCCCGGCGTCTTCCGCGTGGGGAGCATATCCGACAGGCCCAGCGGCTCTGCCATCTACCTTGACACGTCTGTCATGCAGACTGACTACAGAACTTTTGTGGAGATTGTCTTCCAGAACGACGAGGACATCATCCAGTCCTATCATCTTGATGGCTACTCTTTCTTCGTTGTTGGTATGGATGGAGGAACATGGACAGCTGGTAGCAGGAACGAGTACAATCTTCGAGACGCAGTTTCGCGATGCACGACGCAGGTATATCCAAAGTCATGGACAGCAATATATGTGGCGTTGGACAACGTGGGAATGTGGAACTTGAGATCTGAATTCTGGGCAAGGCAATACCTGGGCCAACAATTCTATATGAGAGTGTACACAACATCCACTTCCCTCAGAGATGAATACCCTATTCCCAAGAATGCTCTTCTCTGTGGAAAGGCCTCTGGCCGACACACCCGACCCCTCTAA 1632 0.5257 MAVKRGVASAVVLCVLASVSVSLGEDPYRFFDWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSYEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKANHTDLQRQLDSGRKLALPDGILINGRGENGASFNVEQGKSYRLRISNVGLENSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPPRDYYIVVSTRFTTTVLTTTGILRYSNSAGPVQGPPPGGPTXQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINLTRTIVVSSSAGQVNGKQRYAINSVSYVAPDTPLKVAXFFKIPGVFRVGSISDRPSGSAIYLDTSVMQTDYRTFVEIVFQNDEDIIQSYHLDGYSFFVVGMDGGTWTAGSRNEYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPIPKNALLCGKASGRHTRPL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0951 543 Pfam Multicopper oxidase 35 148 IPR011707 GO:0005507
Amo06g0951 543 Pfam Multicopper oxidase 161 297 IPR001117 -
Amo06g0951 543 Gene3D - 344 540 IPR008972 -
Amo06g0951 543 Gene3D - 28 149 IPR008972 -
Amo06g0951 543 PANTHER OSJNBA0084K11.18 PROTEIN 13 536 - -
Amo06g0951 543 SUPERFAMILY Cupredoxins 345 534 IPR008972 -
Amo06g0951 543 SUPERFAMILY Cupredoxins 155 335 IPR008972 -
Amo06g0951 543 SUPERFAMILY Cupredoxins 24 175 IPR008972 -
Amo06g0951 543 Pfam Multicopper oxidase 396 515 IPR011706 GO:0005507|GO:0016491
Amo06g0951 543 Gene3D - 159 334 IPR008972 -
Amo06g0951 543 CDD CuRO_1_AAO_like_1 30 145 IPR034273 GO:0005507
Amo06g0951 543 PANTHER MULTI-COPPER OXIDASE 13 536 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0951 Amo-Chr6 13022753 13026333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0951 - - gmx:100812416 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0951 06 13022753 13026333 Amo08g0241 08 4016713 4021983 PCT
Amo06g0951 06 13022753 13026333 Amo17g2831 17 130275827 130276246 PCT
Amo08g0241 08 4016713 4021983 Amo06g0951 06 13022753 13026333 PCT
Amo17g2831 17 130275827 130276246 Amo06g0951 06 13022753 13026333 PCT