Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0934 GTAATTTGCGATTCCTACACACCACAGGGTGAGCCTATCCCTACAAACAAGAGACATAAAGCTGTCGAAATTTTCAGTAACCCAAAGATAACCAAAAACCAAATATTTCCTTCTTATGTTCAAAATGATTTGTATCTATATATATATATATATATAGTTTCATTGCATTTGCATGAAGCAACTACTATCATCATTCTATTAGTAGGTGTTGTTAGCATATCATCATCAACGATGGGAAGAGCTCCATGCTGTGAGAAAGTGGGGTTGAAGAGAGGAAGATGGACAGCTGAAGAAGATAGGATATTGACTCAATACATAGAAGAACATGGGGAGGGTTCATGGAGGTCGTTGCCCAAGAATGCTGGACTCTTAAGGTGTGSTAAGAGTTGCAGACTCAGATGGATAAACTACCTCAGATCAGATGTCAAGAGAGGCAACATCACTCCCCAAGAGGAAGAGATCATTGTCAAGTTGCATGCTGTTCTTGGTAATAGGTATATATATATATATATATATTCTTATAGGTTGATTTGTTTCTTGTAA 543 0.372 VICDSYTPQGEPIPTNKRHKAVEIFSNPKITKNQIFPSYVQNDLYLYIYIYIVSLHLHEATTIIILLVGVVSISSSTMGRAPCCEKVGLKRGRWTAEEDRILTQYIEEHGEGSWRSLPKNAGLLRCXKSCRLRWINYLRSDVKRGNITPQEEEIIVKLHAVLGNRYIYIYIYSYRLICFL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0934 180 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 79 167 - -
Amo06g0934 180 SMART sant 90 140 IPR001005 -
Amo06g0934 180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Amo06g0934 180 SUPERFAMILY Homeodomain-like 92 169 IPR009057 -
Amo06g0934 180 Pfam Myb-like DNA-binding domain 91 138 IPR001005 -
Amo06g0934 180 PANTHER MYB TRANSCRIPTION FACTOR 79 167 - -
Amo06g0934 180 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Amo06g0934 180 CDD SANT 93 138 IPR001005 -
Amo06g0934 180 Gene3D - 88 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0934 Amo-Chr6 12900546 12901134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0934 78 169 MYB Transcription Factor Family AT2G47460 80.435 7.17e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo06g0934 Myb_DNA-binding 6.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0934 K09422 - gmx:100805532 171.4