Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0925 ATGGGGCAGTGCTTCACTAAATCCCAAAGTAATAACAGAATCCCAATCTCATATGAACCCGATTCGCCGCCGCCGCCGCCACAGCAGCGTCATCTTCCAAACAGAAGCAAACAACCGGGGCCTGCATACCGTCCAGCAAAATCAGAGGCGGCCTCGTCGTCATCCCATCAGGAGGGATCCATGATAGGGAAGGCTTTGACGGACATAAACGAATTGTACAGGCTGGAGAGGGAGCTGGGAAGGGGGCAGTTCGGCGTGACGTACCTGTGCACGGAGAAGGCGACGGGAAGACAATACGCGTGCAAGTCGATAGCGAGAAGAAAGGTGACGCGGAAGAACGAGATGGATGACGTGAAGAGGGAGATAATGATCCTTCAGCACCTGACGGGGCAGCCCAACATCGTGGAGTTCAAGGGAGCCTACGAGGACAGGCAGCACGTGCATTTGGTGATGGAGTTGTGCCGCGGCGGCGAACTCTTCGACAGGATCATAGCCAGGGGGAGTTACTCTGAGAGGGAGGCTGCTTCCATATGCAGGCAGATCGTCAATGTGGTTCATGTTTGCCACTTCATGGGTGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTGGTTAGTAGGGATCAAAATGCTCCTTTGAAAGCCACTGATTTTGGTTTGTCTGTCTTCATTGAAGAAGATAAAGTGTACAAAGAAATAGTTGGAAGTGCATACTATGTGGCTCCGGAGGTGCTGAAACGCAATTATGGAAAGGAGATAGATGTGTGGAGTGCTGGAGTCATTCTATACATTCTCTTAAGCGGGGTGCCCCCATTTTGGGGTGAAAATGAGAAGCAGATCTTTGATGCTATCTTGGAAGGGAAATTAGATCTAGAAAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTAGCCTATGAACCTAAGAAACGCATCACAGCTTCTGCTGCCCTTGAACACCCTTGGATGAAGGAAGGGGGGGAAGCATCTGACAAGCCTATAGACAATGCGGTTTTAAGTAGGATGAAACAATTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTGATAGCACAAAACCTTTCAGAGGAAGAAATCAAGGGCCTGAAACAAATGTTCAACAATATGGATACGGATCGCAGCGGCACAATCACTTTCGAAGAACTAAAATCTGGTTTGTCCAGATTGGGATCCAAGCTTTCTGAAACTGAAATAAGGCAGCTAATGGATGCTGCTGATGTTGATAAGAGTGGAACCATTGACTATTATGAATTCATTACTGCCACCATGCATCGGCATAAACTTGAGAAGGAAGAAAATTTGTATAAGGCTTTTCAATACTTCGACAAGGATAGCAGCGGGTCAGTACGTAATTATATTCATTCATTTCATCCTCACATTGATATATATGTTGGTCAACACAATTTCATGACCTTGCTCCTCAGTTACATAACAAGAGATGAGCTTAGACATGCTTTGACTGAATATCAAATGGGAGATGAAGCAACTATTGATGAAGTCATTGATGACGTTGACACTGACAAGGTACGGATATTATTATATACTTCCTATCAGTGTTTCATATTATTCATCGCTGTGATGCTTCATTTTGCAGGATGGGAGGATCAACTACGAGGAGTTCGTGGCTATGATGAGGAAGGGGACATTGGATAA 1704 0.4554 MGQCFTKSQSNNRIPISYEPDSPPPPPQQRHLPNRSKQPGPAYRPAKSEAASSSSHQEGSMIGKALTDINELYRLERELGRGQFGVTYLCTEKATGRQYACKSIARRKVTRKNEMDDVKREIMILQHLTGQPNIVEFKGAYEDRQHVHLVMELCRGGELFDRIIARGSYSEREAASICRQIVNVVHVCHFMGVMHRDLKPENFLLVSRDQNAPLKATDFGLSVFIEEDKVYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLSGVPPFWGENEKQIFDAILEGKLDLESAPWPSISAAAKDLIRKMLAYEPKKRITASAALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFNNMDTDRSGTITFEELKSGLSRLGSKLSETEIRQLMDAADVDKSGTIDYYEFITATMHRHKLEKEENLYKAFQYFDKDSSGSVRNYIHSFHPHIDIYVGQHNFMTLLLSYITRDELRHALTEYQMGDEATIDEVIDDVDTDKVRILLYTSYQCFILFIAVMLHFAGWEDQLRGVRGYDEEGDIG* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0925 567 Pfam Protein kinase domain 73 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0925 567 SUPERFAMILY Protein kinase-like (PK-like) 73 332 IPR011009 -
Amo06g0925 567 Gene3D Transferase(Phosphotransferase) domain 1 159 338 - -
Amo06g0925 567 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 38 466 - -
Amo06g0925 567 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 492 532 - -
Amo06g0925 567 SMART efh_1 378 406 IPR002048 GO:0005509
Amo06g0925 567 SMART efh_1 414 442 IPR002048 GO:0005509
Amo06g0925 567 MobiDBLite consensus disorder prediction 1 17 - -
Amo06g0925 567 ProSitePatterns EF-hand calcium-binding domain. 423 435 IPR018247 -
Amo06g0925 567 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Amo06g0925 567 ProSiteProfiles Protein kinase domain profile. 73 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0925 567 Gene3D Phosphorylase Kinase; domain 1 75 158 - -
Amo06g0925 567 Gene3D - 339 538 - -
Amo06g0925 567 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 466 - -
Amo06g0925 567 PANTHER SERINE/THREONINE-PROTEIN KINASE 492 532 - -
Amo06g0925 567 CDD EFh 379 438 IPR002048 GO:0005509
Amo06g0925 567 MobiDBLite consensus disorder prediction 18 32 - -
Amo06g0925 567 CDD STKc_CAMK 73 330 - -
Amo06g0925 567 MobiDBLite consensus disorder prediction 1 61 - -
Amo06g0925 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Amo06g0925 567 SMART serkin_6 73 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0925 567 Pfam EF-hand domain pair 379 439 IPR002048 GO:0005509
Amo06g0925 567 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Amo06g0925 567 ProSiteProfiles EF-hand calcium-binding domain profile. 410 445 IPR002048 GO:0005509
Amo06g0925 567 SUPERFAMILY EF-hand 360 542 IPR011992 -
Amo06g0925 567 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0925 Amo-Chr6 12791947 12795472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0925 1 524 EF-hand Containing Proteins AT3G20410 61.878 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo06g0925 Pkinase 5e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0925 K13412 - jre:108981428 714.531