Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0922 ATGGCTGAGACCACACCCAATCACACACAAACAGTTTCTGGATGGGCTGCTCATGATTCTTCTGGCAACATAACCCCCTACACTTTCAAAAGAAGAGACAACGGTGTTAATGACGTGAGCATAGAAATCTTGTACTGCGGGATTTGCCACACGGACATTCACTACGTTAAAAATGAATGGGGAATCACTAGGTACCCGGTTGTTCCGGGGCACGAGATCGTTGGGGTGGTAAGCAAGGTGGGGAGGGAAGTGAAGGGATTCAAAGAAGGAGACAGAGTAGGAGTGGGGTGTTTGGCAGCAACATGCTTGGAATGTGAGTATTGCAAGACCGATCAGGAGAACTACTGCGAGAAACTTGAGTTCACTTACAATGGAGTTTTCTGGGATGGTAGCATCACTTATGGTGGCTACTCAAAAATGCTGGTCGCTGATTACAGATACGTGGTACATGTGCCGGAGAATCTGCCAATGGACGCAACGGCACCACTGCTGTGTGCTGGAGTGACGGTGTTCAGTCCCTTGAAAGACCACGGTTTGGTTGAATCGCGAGGGAAAAGCATTGGCATTGTGGGCTTGGGTGGTCTTGGCCACGTGGCTGTCAAGTTTGCCAAGGCCTTTGGACACCATGTCACTGTCATAAGCACTTCTCCTTCCAAAGAGGCGGAGGCTAAGGAGCGTTTGGGTGCCGACCATTTCATAGTCAGCTCCAACCCCAAGCAAATGCAGGGTGCCAAGAGAACCCTTGATTTCATTTTGGACACTGTTTCAGCTGAGCACTCTCTTTTGCCCATTTTGGAATTGCTCAAAGTTAATGGCACTTTGTTTATTGTGGGTGCACCCGACAAGCCATTCCAATTGCCCGCATTCCCATTGATATTTGGGAAGAGATCAATCAAAGGTGGGATCATAGGAGGAATAAAAGAAACCCAGGAAATGTTGGACGTTTGTGGGAAGCACAACATCACATGTGACATTGAATTAATCACTCCAGACAGAATCAACGAAGCTCTTCAACGTCTTGCTAACAATGATGTCCGCTACCGTTTTGTCATTGACATCGCTGCTGCCACCTCTAATAACTAA 1083 0.4774 MAETTPNHTQTVSGWAAHDSSGNITPYTFKRRDNGVNDVSIEILYCGICHTDIHYVKNEWGITRYPVVPGHEIVGVVSKVGREVKGFKEGDRVGVGCLAATCLECEYCKTDQENYCEKLEFTYNGVFWDGSITYGGYSKMLVADYRYVVHVPENLPMDATAPLLCAGVTVFSPLKDHGLVESRGKSIGIVGLGGLGHVAVKFAKAFGHHVTVISTSPSKEAEAKERLGADHFIVSSNPKQMQGAKRTLDFILDTVSAEHSLLPILELLKVNGTLFIVGAPDKPFQLPAFPLIFGKRSIKGGIIGGIKETQEMLDVCGKHNITCDIELITPDRINEALQRLANNDVRYRFVIDIAAATSNN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0922 360 PANTHER ALDEHYDE REDUCTASE 1 356 - -
Amo06g0922 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 356 - -
Amo06g0922 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Amo06g0922 360 SUPERFAMILY GroES-like 18 181 IPR011032 -
Amo06g0922 360 CDD CAD1 14 352 - -
Amo06g0922 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Amo06g0922 360 Gene3D - 166 323 - -
Amo06g0922 360 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Amo06g0922 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Amo06g0922 360 Gene3D - 15 353 - -
Amo06g0922 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0922 Amo-Chr6 12684709 12686319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0922 14 354 Monolignol Biosynthesis Gene Families AT2G21730 57.310 1.09e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0922 K00083 - gmx:100820588 623.239