Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0920 ATGTATAATAAGTTATTCTGTGACTGTGAGAAAATGGTGAGTGTTGTTGCTTTGGTTTTCTTGGGCACCATGTTTGCATTAGTAGCAGCAACAAATGGTGGACAGTATCCAGCATTATTTGCATTTGGAGATTCGATTCTTGATACCGGAAATAACAACCACCTTGCAACTTTAACCAAGTCTAATTTTCCTCCGTACGGAAGAGATTTTATTGGAGGAAAACCAACAGGAAGATTCTGTGATGGGAAAGTCCCATCAGATCTTATAGCGGGAGATCTTGGAATCAAAGGCACGTTACCTGCATATCTTGATCCAAATTTGCGGAATGAAGATCTTTCCACGGGTGTAAGCTTTGCCTCAGGTGGAACAGGAAATGATGATCTCACCGCTCAAACACAGGGTGCTTTATCACTATCGACACAAATGAAAAATTTCCAAGAGTGCATAGGAAGGCTGAGAGCATTTATGGGAGAAGAAAGAGCGAAGTACATCATATCAAACAGCTTGTATCTGCTTTCATCAGGAAACAATGATATTGCACTCACTTATTCTTCACCACTCAGAAGCACCATACCTTTCCCTTTATACGCTTCTCAATTAGTTGGCTGGGCCTCGGATTTTCTCAAGCAACTATACGATGCCGGAGCAAGAAAAGTGTGGGTTCTGAGTACATTGCCATTGGGGTGCTTGCCGGGAGGTAGAACTGTAGCAGGAGGTCCTTTAAGATTGTGTTCTGATACTGTTAATAGAAAAGCTCAATTATTCAATGATCAATTAGCATCGGCTGTTAGTTCTTTACAAGGCACACTTTCTGGTTCTGCCTTTCAATTCATTGATATCTATGCTACACTGCTCAATATCATACAAAATCCTTTTAGCTCAGGGTTTCTAAATGTTGCAAATGGATGTTGTGGGACTGGACTGGTTGAGATTGGAGAGACATGTAAGTTAGCCCTTGGTTCCTGCCCAAATCCTGCAGCATATGTTTTCTGGGACGCTGGTCATCCAACTCAAAGAGCCTATGAGCTCATAGTCTCTTCTATACTGCCAAAATAG 1056 0.4167 MYNKLFCDCEKMVSVVALVFLGTMFALVAATNGGQYPALFAFGDSILDTGNNNHLATLTKSNFPPYGRDFIGGKPTGRFCDGKVPSDLIAGDLGIKGTLPAYLDPNLRNEDLSTGVSFASGGTGNDDLTAQTQGALSLSTQMKNFQECIGRLRAFMGEERAKYIISNSLYLLSSGNNDIALTYSSPLRSTIPFPLYASQLVGWASDFLKQLYDAGARKVWVLSTLPLGCLPGGRTVAGGPLRLCSDTVNRKAQLFNDQLASAVSSLQGTLSGSAFQFIDIYATLLNIIQNPFSSGFLNVANGCCGTGLVEIGETCKLALGSCPNPAAYVFWDAGHPTQRAYELIVSSILPK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0920 351 CDD SGNH_plant_lipase_like 37 351 IPR035669 -
Amo06g0920 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 349 - -
Amo06g0920 351 SUPERFAMILY SGNH hydrolase 117 350 - -
Amo06g0920 351 PANTHER GDSL ESTERASE/LIPASE EXL3 10 349 - -
Amo06g0920 351 Pfam GDSL-like Lipase/Acylhydrolase 39 346 IPR001087 GO:0016788
Amo06g0920 351 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 39 50 IPR008265 GO:0006629|GO:0016298
Amo06g0920 351 Gene3D SGNH hydrolase 27 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0920 Amo-Chr6 12660936 12662338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0920 9 349 Pollen Coat Proteome AT1G75910 41.954 4.06e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0920 - - aip:107646231 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0920 06 12660936 12662338 Amo08g0214 08 3577373 3580819 PCT
Amo06g0920 06 12660936 12662338 Amo17g1570 17 60605212 60609339 PCT