Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0912 ATGGTTGTTTCTACTATGAAGGTGTGGTTATGTGGTGGTTGTTTGTTCCTCCGTTGCATAATATTGTTAGGTGTGTTATGCAAAACAAAAGGATTGGTGAAACTGCCACCGAATGTAACGGTTCCGGCAGTGTATGTGTTTGGAGATTCGATCGTGGACACAGGAAACAACAACGGTAACAAGCTAACGCCGGCAAAATGCAACTACCCGCCGTATGGCAAAGATTTCAAGGGAAGCATACCGACTGGCCGCTTCAGCAATGGCAAGGTTCCAGCAGACCTTATTGTTGAAGATTTAGGTATTAAAGAGTATCTACCAGCATACTTGGATCCAAATCTCCAATCTAGTGATTTGCTTACTGGGGTGAATTTTGCATCTGGTGGTGCTGGATATGACCCTCTCACTTCACTATCAGCGGCTGCTATATCTTTATCGGGACAAGTAGATTTGTTCAAAGAATGCATAGGGAAGTTGAAAGGAGAGGTTGGAGAGGAGAGAAGCAATTTCATCCTAAACAACAGTTTCTATATTGTGGTTTTTGGAAGCAATGACATCTCCAACACCTACTTCTTGACTCGCGTTAGGCAGTTACAATATGACATTCCTACTTACACTGACATTCTCCTCAAATCAGCTTCTAATTTCTTGAAAGAATTATACCAACTTGGTGCAAGGAGAATTGCGGTATTCGGTATTCCACCCCTTGGATGTATACCATTTCAGAGGACGGCAGCTGGTGGAATAGAAAGAAATTGTGCAGAACAAATAAATGATGCTGCAAAGTTCTTTAATTCCAAACTCTCAAACAAGATTGATTCCTTTAATCAACAATTACCAGATGCCAGGACTGTTTACATTGATGTTTACACCCCTCTTCTCGATATCATTCTAAACTACCAAAAATATGGTTATAAAGTGGCAAACAAAGGTTGCTGTGGAACAGGGATAATAGAGGTAGTGGAATTATGCAATCGATTTGTTCCAACGTGTCCCAATGATTTGGAGTATGTCTTTTGGGATAGCTTTCACCCTACCGAGATCGTTTACAAAAGCCTCATTTCTCCAATTGTTTCTAAATATCTCCCCAAATTCTTAACATTGGGTCTTGTGAGATTGCCACCAAATGTTACTATTCCTGCAGTGTTTGTGTTCGGAGATTCCATAATGGATACTGGAAACAACAACAACAACTTGAAAACGGAAGCAAGGTGCAATTTCCCACCATATGGAGAAGATCTTGAAGGTGGAGGAATGCCTACCGGAAGGTTTAGCAATGGAAAGGTTCCATCAGATTTTGTAGTTGAAGAATTAGGCATAAAAGAGCTTCTACCAGCATATTTGGATCCAAATCTACAACCCACTGATCTTGTCACCGGTGTCTGCTTTGCATCCGGTGGCGCCGGCTATGATCCCTTAACGTCAAAACTTGCGTTGGAATATGATGTCCCTGCTTACACTGATCTATTGCTCCGCTTAGCCTCTACTTACTTTAAGAGAACAGTGGCTGGAGGAATAACAAGACAGTGTGTGGATAAGATAAATGATGCATGCAAGTTATTTAACGCCAAACTGCCAAATGCATTGGATTCCCTCAACAGGAATCTGCCAGATTCCAGATTTGTATTTATTGATGTCTACAACCCTTTACTTGACGTTATTGTCAACTACCCAAAATATGGATATAAAATTGAAGACAGAGGGTGCTGTGGCACGGGCAAAATAGAAGTTACGTTTTTATGCACGCAGTTGCAACCAACTTGTCCCAACGTTTTGGATCATGTTTTTTGGGACAGTTTTCACCCGACGCAATCTGTTTACAAAAAGCTCGTCGCCTCTGTTCTACAAAAATACATACAGCCTCTTTCCGTGTGA 1872 0.4135 MVVSTMKVWLCGGCLFLRCIILLGVLCKTKGLVKLPPNVTVPAVYVFGDSIVDTGNNNGNKLTPAKCNYPPYGKDFKGSIPTGRFSNGKVPADLIVEDLGIKEYLPAYLDPNLQSSDLLTGVNFASGGAGYDPLTSLSAAAISLSGQVDLFKECIGKLKGEVGEERSNFILNNSFYIVVFGSNDISNTYFLTRVRQLQYDIPTYTDILLKSASNFLKELYQLGARRIAVFGIPPLGCIPFQRTAAGGIERNCAEQINDAAKFFNSKLSNKIDSFNQQLPDARTVYIDVYTPLLDIILNYQKYGYKVANKGCCGTGIIEVVELCNRFVPTCPNDLEYVFWDSFHPTEIVYKSLISPIVSKYLPKFLTLGLVRLPPNVTIPAVFVFGDSIMDTGNNNNNLKTEARCNFPPYGEDLEGGGMPTGRFSNGKVPSDFVVEELGIKELLPAYLDPNLQPTDLVTGVCFASGGAGYDPLTSKLALEYDVPAYTDLLLRLASTYFKRTVAGGITRQCVDKINDACKLFNAKLPNALDSLNRNLPDSRFVFIDVYNPLLDVIVNYPKYGYKIEDRGCCGTGKIEVTFLCTQLQPTCPNVLDHVFWDSFHPTQSVYKKLVASVLQKYIQPLSV* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0912 623 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 23 360 - -
Amo06g0912 623 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 497 618 - -
Amo06g0912 623 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 366 477 - -
Amo06g0912 623 SUPERFAMILY SGNH hydrolase 43 360 - -
Amo06g0912 623 CDD SGNH_plant_lipase_like 379 617 IPR035669 -
Amo06g0912 623 PANTHER GDSL ESTERASE/LIPASE EXL3 497 618 - -
Amo06g0912 623 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
Amo06g0912 623 PANTHER GDSL ESTERASE/LIPASE EXL3 366 477 - -
Amo06g0912 623 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 381 392 IPR008265 GO:0006629|GO:0016298
Amo06g0912 623 Gene3D SGNH hydrolase 480 620 IPR036514 -
Amo06g0912 623 Gene3D SGNH hydrolase 35 360 IPR036514 -
Amo06g0912 623 Pfam GDSL-like Lipase/Acylhydrolase 44 352 IPR001087 GO:0016788
Amo06g0912 623 Pfam GDSL-like Lipase/Acylhydrolase 381 473 IPR001087 GO:0016788
Amo06g0912 623 Pfam GDSL-like Lipase/Acylhydrolase 506 609 IPR001087 GO:0016788
Amo06g0912 623 CDD SGNH_plant_lipase_like 42 360 IPR035669 -
Amo06g0912 623 PANTHER GDSL ESTERASE/LIPASE EXL3 23 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0912 Amo-Chr6 12570863 12582478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0912 499 615 Pollen Coat Proteome AT1G75910 32.773 3.96e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0912 - - cpap:110818117 649.432