Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0893 ATGGAATCTTTTGATCAAAGAAACAATAGTGGAGTATTTGGTTCTTCAGCTGCAGTTCCTAGACCACCATCGAACAATAACAGATTGAATGCTTTTAATCAGATGGGTGCAGGTGGCTCTGAGAATCCGAAGCCYGGTATTGGTATACCGCCATCACACCCTAGTACWAATTTGCCATATTCTCAGTATATAGCTTCTCAAAACCAACACCATTTAGGTTCTCAGAGACTGCGTTCGCCCAATTTGAGCCCAGGGTCATCATCATCTTCGTCGCATTCGAGGTCTATGTCCCAACCCTCATTCTTTTCCCTTGATTCCTTGCCACCATTGAGCCCTTTGACTTATCGAGACCCTGTTGCTTCTCCGGTGCCAGCTGCAACCTCTTTTGGTGATTCGGTCGCAATGGATGTGTCTATGGAGGAAAATTTAGGTTCRACTCATACTGCYCCSTCTTTGACCGRCAACAGAGGTCATAGTCTTCCTCCTCGCAAGGGGCACAGGCGCAGCAATAGTGATTCCCCTTTAGGAATATCCGGTCTTGTTCAATCTTATTCTCAGTCAGTTCCTACTAAGAATGTGAGCGACCGGGACAATTTGGTCTCCAAAGGAGAAAACACTGGTTTTGAGAAGCCAATTCAGTTAGTTTTAAAGGAGCCAAGTAAGGATATGGTCCATTTTGACTGCTTTACTGGAGAAGCTATGGGCAAGAAAGAGGATTGCATAGATGATTTATTTAATGCGTACATGAATTTGGATAACATACAAAATATGAACTTTCCTGGCATGGAAGATAAGGATTTGGATAGCAGAACTAGTGGTTCAAAGACGGTTGAAAGTAGTGACAATGAAGTAGAAAGTCATGCGAATGGAAAGACAACTTATGCTCAGGGAGCAACTTCAAGCTATAAAGAAGAACGGAAGGAGGGTATCAAGAGGGGTTCTAGTGGAGACATTGCACCGGTAGGCCGACACCGGAGAAGCTTTTCATTGGATAGTTCCATCGGGGATTTTCAGCTTGAAGATGAATCTTCTAAGCTGCCTCCTTTGCAAAATCGATTTGGTCAACACTCGCCTAGCAATTCAATAGATGGTAAAACATCTGACACCAGTATAGAGTTTGTAAAGCGTGAATTCAGCTCAGATGAGTTAAAGAAAATAATGGAAAGTGACAAGCTCACTGAGATTGCCATGGCGGATCCAAAGCGTGCAAAACGGATTTTGGCTAATCGTGTCTCAGCTGCTCGGTCAAAGGAAAGGAAAACACGATATATTTCTGAACTGGAGCATAAGGTGCAAACTCTTCAGGCAGAAACAACCTCATTGTCTACTCAATTTACTAAACTACAGATGGATAATTCAGAGCTTAAAAGTTTGAATAATGAGTACAAATTGAAGCTTCAAGCCTTGGAACAACAGTCCCAACTGAAAGATGCTTTGAATGAGACCTTGGATGCTGAAGTTCGGCGATTAAGGCGCACTGTCGCAAATCTTGGTGGAGATCCCCTCCTCTAA 1512 0.4306 MESFDQRNNSGVFGSSAAVPRPPSNNNRLNAFNQMGAGGSENPKPGIGIPPSHPSTNLPYSQYIASQNQHHLGSQRLRSPNLSPGSSSSSSHSRSMSQPSFFSLDSLPPLSPLTYRDPVASPVPAATSFGDSVAMDVSMEENLGSTHTAPSLTXNRGHSLPPRKGHRRSNSDSPLGISGLVQSYSQSVPTKNVSDRDNLVSKGENTGFEKPIQLVLKEPSKDMVHFDCFTGEAMGKKEDCIDDLFNAYMNLDNIQNMNFPGMEDKDLDSRTSGSKTVESSDNEVESHANGKTTYAQGATSSYKEERKEGIKRGSSGDIAPVGRHRRSFSLDSSIGDFQLEDESSKLPPLQNRFGQHSPSNSIDGKTSDTSIEFVKREFSSDELKKIMESDKLTEIAMADPKRAKRILANRVSAARSKERKTRYISELEHKVQTLQAETTSLSTQFTKLQMDNSELKSLNNEYKLKLQALEQQSQLKDALNETLDAEVRRLRRTVANLGGDPLL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0893 503 MobiDBLite consensus disorder prediction 286 300 - -
Amo06g0893 503 MobiDBLite consensus disorder prediction 171 201 - -
Amo06g0893 503 MobiDBLite consensus disorder prediction 339 366 - -
Amo06g0893 503 MobiDBLite consensus disorder prediction 1 37 - -
Amo06g0893 503 ProSiteProfiles GGDEF domain profile. 443 503 IPR000160 -
Amo06g0893 503 SMART brlzneu 397 461 IPR004827 GO:0003700|GO:0006355
Amo06g0893 503 MobiDBLite consensus disorder prediction 139 155 - -
Amo06g0893 503 Coils Coil 417 444 - -
Amo06g0893 503 MobiDBLite consensus disorder prediction 1 205 - -
Amo06g0893 503 Gene3D - 400 463 - -
Amo06g0893 503 MobiDBLite consensus disorder prediction 54 107 - -
Amo06g0893 503 MobiDBLite consensus disorder prediction 256 324 - -
Amo06g0893 503 PANTHER BZIP TRANSCRIPTION FACTOR 72 502 - -
Amo06g0893 503 CDD bZIP_plant_RF2 402 452 IPR044759 GO:0003700|GO:0006355
Amo06g0893 503 Coils Coil 452 489 - -
Amo06g0893 503 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 72 502 - -
Amo06g0893 503 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 399 462 IPR004827 GO:0003700|GO:0006355
Amo06g0893 503 Pfam bZIP transcription factor 401 459 IPR004827 GO:0003700|GO:0006355
Amo06g0893 503 SUPERFAMILY Leucine zipper domain 401 457 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0893 Amo-Chr6 12221039 12225081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0893 47 495 bZIP Transcription Factor Family AT4G38900 43.816 1.31e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo06g0893 bZIP_1 2.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0893 - - adu:107493272 942.184