Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0891 ATGGTGAAATCTAGCTCGTGCTTGAAGCTCATCACTTGCGGTGGTGGTCCTGATTCTGGAGACACAGATTACCAACCAGTCTCTGAGGTCAAGGATACTAGTGATAAACGTGGTTGGAGTTTCCGGAAGCGATCTGCAAGGCACCGCGTGCTTAGCAACACTGTAATAACAGAAACCCCATCTTCGGCAAACAAGGAGAGTTCAGAATGTAGAAGTATTAGTTTTCAACCAGTGCCGGCTGAACATAATGTTGTTGAGAAAATTCATACAACAAATGTCTCTGATGAGAAGCCTCAGTTACTGTCCTTGGYAAGTTCACAAATACCAGAAACAATTGTTACAGAAACCAAGAATATGGTGGATGTTGARCCAAATCCACCTGAATCAGCTGTTATCATCATCCAGGCTGCCATTAGAGGGTTCTTGGCTCGGAGAGCATTGCTAAAGAGCAAGAATGTAGTCAAGTTGCAAGCTGCTTTTCGAGGCCACTTGGTCAGGAGGCATGCCGTAGGAACGCTTCGATGTGTTCAAGCGATTGTTAAAATGCAACTCCTTGTCCGAGCTCGTCGTGCTCAGCAGGGTAATGTAAATCACGTGACACACACTTCCATGGAGAAGCTAGCGAGCAACAAGTTCGCTTGTCAGCTGTTGGAATCAACACCAAGAAATAAACCTATTGGTGTCAAATGTGACCCTTCAAAAAGTGATTCTGCTTGGAGATGGTTGGAGAGATGGATGTCTGTTTCATCAGCAGATTCTGCAGATAACGTAAAACCAGTTGGCATGCCTGAACAATCAGACAAAACCAAAAAGGACACTTCTGTTTCTCAATCGGAAATGGACATTCAAACCGAAGTTGTTCTTCAGTCATCTGGCTCTAGGGAATTGCCTCCAGCATCTGAGGATGAAGATAAGACAACCACTTATGATGCTAATAACTATAACTATGATGCAAACCATTCTACGTCTTCTTTCGTACCACTTGACTTGGAAGAGGTTCCTGAAAAGACTTTTATCAGTGATGATAAAGGAACAGCAACTGAAATTAATTCTTTCCAAAATGGCAAAATGGAAGCGAATGCAAGTGTCCCGGAGGAACCTGGTCCTATTGATCAGAAGCCTGAAATTGATGGTGAAGCAGACAGACAATCTACAAATCAATTTGACTCAGACCAACTCGAGACTGAGGGAAAGAAACTTGTGCATGGAACAAGGAAGTCTAATAATCCCGCTTTTATTGCCATGCAGTCAAAATTTGAAGAGCTGACTTCAATGGCCAATTCAAGTAAATCAAGCAGTCTGTCCAATCAAGATGCACCACTTGAATCACAAGCAGAGACATCTTCTATTGTTGCAGTTACTGCACATAGATCGAAGGAGTTCTTCTCATCTGAGAATTCTGCAAATTATCCTTTCATAACTGTTGGGTCGTCTGAATGTGGTACTGAACTCTCAGTAACTTCTACTCTTGATTCACCTGACAGATCTGAGGCCGGGGCTAAGGAAAGTGAGCATGATGCCAAAGATTTGGTAGAAAGGATTGATAATCCTGAAAGTAAGACGGATCATGGTCTTGATCCCAATATAGTGCAGGCTGCTCCAACTAATAGCATACCAAACTCATATTCAGATCAATTAGAGATCATTGATGACATAAGCAACAATGTTAACCATCCAGGGCTAGTTGGGAATTCTCAAGAGGTTGCTGTTAAGCCTGAGCAAAATGCATCTGACCTATTGAGAGAACCGGAAGAGGCCATTCAACAAGATTCCAAGTTGTCTCCGGAAGCTTCCCCAATAAGTCAGCAATATCAACTAGGAACACCTTCTAGTCAGGTATCGTTGACCATTCCTGATTCTCAAGGAACACCATCAAGTCAGGTATCCATCAAACCTAAAGAGAAGAAAACCAACAAGACTGGATCCGGCAATAAGCGTAAAATCCTGTCTTCCGATAACAAATCTCCTGCAAGTGCAAATCATGATTCAGGCACAAGAGGTAGTAGGGAACAACAACCTAAAGATCAACCGAGCGGAAAGAGACGCAGTTCCTTCGGCTCAGCAAAATCTGATCACATTGATCAAGAAGCAAGAGATAACAGTAGTAACAATAGTTCTATTCCCCATTTCATGCAAGCTACTGAATCTGCTAGGGCCAAGATGAATGCAAATAACTCTCCAAGATCYAGTCCGGATGTAKATGACCAAGAAATCCATCTTAAGAAGAGACATTCCCTACCCGGTGCAACTGGCAGGCAGGACTCTCCACGCATCCAGCGATCACCACAGTCAAGCACGAAGGGAAATGGTGTGCATCTTCAACATGAGAGAAAATGGCAGAGATGA 2346 0.4314 MVKSSSCLKLITCGGGPDSGDTDYQPVSEVKDTSDKRGWSFRKRSARHRVLSNTVITETPSSANKESSECRSISFQPVPAEHNVVEKIHTTNVSDEKPQLLSLXSSQIPETIVTETKNMVDVEPNPPESAVIIIQAAIRGFLARRALLKSKNVVKLQAAFRGHLVRRHAVGTLRCVQAIVKMQLLVRARRAQQGNVNHVTHTSMEKLASNKFACQLLESTPRNKPIGVKCDPSKSDSAWRWLERWMSVSSADSADNVKPVGMPEQSDKTKKDTSVSQSEMDIQTEVVLQSSGSRELPPASEDEDKTTTYDANNYNYDANHSTSSFVPLDLEEVPEKTFISDDKGTATEINSFQNGKMEANASVPEEPGPIDQKPEIDGEADRQSTNQFDSDQLETEGKKLVHGTRKSNNPAFIAMQSKFEELTSMANSSKSSSLSNQDAPLESQAETSSIVAVTAHRSKEFFSSENSANYPFITVGSSECGTELSVTSTLDSPDRSEAGAKESEHDAKDLVERIDNPESKTDHGLDPNIVQAAPTNSIPNSYSDQLEIIDDISNNVNHPGLVGNSQEVAVKPEQNASDLLREPEEAIQQDSKLSPEASPISQQYQLGTPSSQVSLTIPDSQGTPSSQVSIKPKEKKTNKTGSGNKRKILSSDNKSPASANHDSGTRGSREQQPKDQPSGKRRSSFGSAKSDHIDQEARDNSSNNSSIPHFMQATESARAKMNANNSPRSSPDVXDQEIHLKKRHSLPGATGRQDSPRIQRSPQSSTKGNGVHLQHERKWQR* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0891 781 MobiDBLite consensus disorder prediction 699 732 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 276 296 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 343 358 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 495 522 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 591 631 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 483 781 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 643 666 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 370 384 - -
Amo06g0891 781 PANTHER PROTEIN IQ-DOMAIN 32 1 776 - -
Amo06g0891 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 192 IPR027417 -
Amo06g0891 781 Gene3D - 127 174 - -
Amo06g0891 781 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Amo06g0891 781 Pfam IQ calmodulin-binding motif 151 168 IPR000048 GO:0005515
Amo06g0891 781 ProSiteProfiles IQ motif profile. 149 178 IPR000048 GO:0005515
Amo06g0891 781 MobiDBLite consensus disorder prediction 342 446 - -
Amo06g0891 781 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Amo06g0891 781 MobiDBLite consensus disorder prediction 530 572 - -
Amo06g0891 781 PANTHER IQ-DOMAIN 5-RELATED 1 776 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 752 770 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 409 446 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 253 321 - -
Amo06g0891 781 MobiDBLite consensus disorder prediction 734 748 - -
Amo06g0891 781 SMART iq_5 149 170 IPR000048 GO:0005515
Amo06g0891 781 SMART iq_5 126 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0891 Amo-Chr6 12193208 12198792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0891 128 248 IQD Protein Family AT1G19870 61.240 1.50e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0891 - - aip:107645297 1515.75