Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0884 ATGGACCGGCGGTGGCCATGGAAGAAGAAATCATCTGACAAGGCTGTGCTTGAGAAAGCAGCAGCAGCATTGGATTCTGCTAGTGCATCATCTGAGGCTAATCAGGAGAGCTACAAGAAGCCAAACTATGTCCAAATCTCCGTAGAGTCGTACACGCATCTGACTGGTTTAGAAGATCAAGTGAAGACATGTGAAGAAAAAATTCAGACATTGGAGGATGAGATCAAAGACTTGAATGAAAAGCTGTCGGCGGCGAACTCGGAGATAAATACCAAGGAGAGCTTGGTAAAACAGCATGCTAAAGTAGCCGAAGAAGCTGTTTCAGGCTGGGAAAAGGCTGAAGCCGAAGCTTTGGCATTGAAGAACCATCTGGAAACCGTCACTCTCTCAAAACTCACTGCTGAGGACCATGCATCACAATTGGATGGTGCTCTTAAGGAGTGCATGCGGCAGATAAGAAACCTGAAGGAAGAACATGAACAGAAAATACAGGAAGTCGCTCTCACAAAAACCAAGCAACTTGACAAGATTAAGGGTGAGCTTGAGGCAAAGATAGCCAGCTTTGAACAAGAGCTCCTGAGGTCCGCTGCTGAAAATGCGGCTTTGTCAAGAACCCTGCAGGAGCGTTCTAACATGATAATCCAATTGAGCGAAGAAAAAGCTAATGCTGAGGCTGAAATTGAGCATCTTAAGGGCAACATAGAATCATGCGAAAGAGAAATCAGTTGTCTTAAGTATGAAATCCATGTCATTTCCAAAGAGCTCGAGATTCGCAATGAAGAAAAGAACATGAGTATGAGATCAGCAGAAGTTGCTAATAAGCAGCACCTGGAGGGTGTTAAGAAAATTACTAAATTGGAGGCAGAATGCCAAAGACTACGTGGTCTTGTGCGGAAGAAGTTACCTGGACCAGCTGCTCTTGCACAAATGAAACTAGAGGTTGAGAATCTTGGTAGAGATTATGGAGAAAGTCGATTAAGGAAGTCTCCCGTCAAACCTGCTAGTCTTCACATGCCTCCTGTGCCCGAATTCTCCCTTGAGAATGTACAGAAATTCCAGAAGGATAACGAATTCCTTACAGAGCGCTTATTGACGATGGAAGAAGAGACAAAGATGCTCAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTAAGCAAACTTCAATTATTGGAAGCGCAAAGTAATCAACAAAAAGGATCTCCAAAATCTACCGTCCATATAACCCCTGAAAACATTTACGGGCACAATGCAAGCTATGCACCGAGTTTGATCTCCATGTCTGAAGATGGAATCGATGATGCTGCAAGTTGTGCTGAATCTTGGTCTACAGCGGTAATATCCGAGCTATCCCAATTCCCAAAAGAGAAGAGCACTGATGAGTTTAGCAAATCTGAAGCCTGTAAGAAATTGGAGCTAATGGATGACTTTTTGGAGGTGGAGAAGCTGGCTCGGTTATCAAATGACTCTAACGTAGATGCCACAGTTTCAGTTCCTTCAATTGATAAGACGACCGAAGTTATGACTAATGATGTGTCAGAAGTCAGTACCGGTAAAGATGATACCTCGGAAAATAAGAGTGGCTCAACTCCATCACCAAATGAAGTATCTTCTGATGCAGTGTTGCCAGAACCTGATCCAAAGTCTAATGTTGATGGTTTGTTGTTCGCAGAGGTCCAATCAAAAATATTATCTATTTTTGAGTCCATATCAAATGATGCTGATATAGCGAAGATCCTGGAAGAAGTTAAACGTGTTCTTGAAGTTGCACCCAACACGTCAGTCCGGGACCCTGAAGCTGTTATCTCTGAGGATGTTAAGCCTTCTGAGACTCCATGTGAGAAGCAGCATAATCATGAAGATGCTGGCTCAAGTACCCAAAAAGAACTCATTTCGTCTGAGCAACCTACAGAGTATGAGCAGATAAGCTCAGATTTAGAGGCTGCCTTCTCTCAGATTCATGATTTTGTCTTGCTTCTAGGCAGAGAAGCTACGACGGTTCATGAGATATCTTCCGATGAAGATGGAATAAGCAGAAAGCTGGAGGAGTTCTCCGCCACCTTTAATAAAGTTACAAGCAATAAAGCAACCTTGCCACAGTTTGTTCTTGATCTGTCTTATGTTTTAGCTAAAGCAAGTGAATTCAGAATCAATATCCTTGGTTACAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGTATAGATAAGATTGCTTTGCCGGAAAATAAGTTAGTTCAGAATGATTCGAAAGGAGAGAGATATCAGAATGGTCATTCCGATATTCTTAATCCCTGTTCTGATCCTGAGGTCCCTGATGACGGAAATCCGATTTCAGGTTATGAATCGAATGTTGCAGCACAAAAGATCACGATTGAGGAATTTGAAGAACTGAAGTCCGAGAAAGAGAAGGCTGTAGCAGATCTGTCAAAATGTGTTGAAAGTCTTGAAACCACAAAATCTCAATTGCAAGAGACAGAGCAACTTCTAGCTGAAGTTAAGTCACAACTGACTTCTGCTCAAAGATCAAACAGCTTGGCGGAGACACAACTGAAATGTATGGCAGAGTCTTACAGGTCACTTGAAGCACGCGCCCAGGAATTTGAAACCGAACTAAATCATCTGCGTGCAAAGATGGAAACTCTGGAAAATGAACTGAGAGAGGAAAAGAAGGGTCATGAAGCAGCTTTGGCCAAGTCCAAGGAGCTAGAGGAGCAATTACAAAGGAGTGAAAGCGCAGCCGCTGATAATGAACTTAAGAACAAGCAGGAGAGAGAGTTGGCTGCTGCTGCTGAAAAGCTAGCTGAGTGTCAAGAAACCATATTTCTTCTTGGCAAACAATTGAAGTCTTTGCACCCTCAAATGGAGCCACCAATGGTGTCTCCATACAATGAGAGAAGTCAAAAGGTTGAAGGCTACACAGAGCATAATGGTCATGCTCCTCATAGCCCAAATCTTCAAGATCATTCTGAAATGGACACTGCTAATTCTGGTTTTGTGCAAAGACAAGGTGCTGAGTCCCCTTTGCATTACACCAATACTTTATATAGCCCCTCAGATAATGAGTCAAACTTCCAATCTATGCAATCAAACCACAGGCCTACAAAATCAGCATCTTCTTCTTCAGCCTCCTCAACTACTACACCAGAGAAACATGCAAGGGGTTTTAGTAGATTCTTCTCATCAAAAGGAAAAAATGGTCATTGA 3237 0.4272 MDRRWPWKKKSSDKAVLEKAAAALDSASASSEANQESYKKPNYVQISVESYTHLTGLEDQVKTCEEKIQTLEDEIKDLNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLETVTLSKLTAEDHASQLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELEAKIASFEQELLRSAAENAALSRTLQERSNMIIQLSEEKANAEAEIEHLKGNIESCEREISCLKYEIHVISKELEIRNEEKNMSMRSAEVANKQHLEGVKKITKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVKPASLHMPPVPEFSLENVQKFQKDNEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQLLEAQSNQQKGSPKSTVHITPENIYGHNASYAPSLISMSEDGIDDAASCAESWSTAVISELSQFPKEKSTDEFSKSEACKKLELMDDFLEVEKLARLSNDSNVDATVSVPSIDKTTEVMTNDVSEVSTGKDDTSENKSGSTPSPNEVSSDAVLPEPDPKSNVDGLLFAEVQSKILSIFESISNDADIAKILEEVKRVLEVAPNTSVRDPEAVISEDVKPSETPCEKQHNHEDAGSSTQKELISSEQPTEYEQISSDLEAAFSQIHDFVLLLGREATTVHEISSDEDGISRKLEEFSATFNKVTSNKATLPQFVLDLSYVLAKASEFRINILGYKGTEAETNSPDCIDKIALPENKLVQNDSKGERYQNGHSDILNPCSDPEVPDDGNPISGYESNVAAQKITIEEFEELKSEKEKAVADLSKCVESLETTKSQLQETEQLLAEVKSQLTSAQRSNSLAETQLKCMAESYRSLEARAQEFETELNHLRAKMETLENELREEKKGHEAALAKSKELEEQLQRSESAAADNELKNKQERELAAAAEKLAECQETIFLLGKQLKSLHPQMEPPMVSPYNERSQKVEGYTEHNGHAPHSPNLQDHSEMDTANSGFVQRQGAESPLHYTNTLYSPSDNESNFQSMQSNHRPTKSASSSSASSTTTPEKHARGFSRFFSSKGKNGH* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0884 1078 MobiDBLite consensus disorder prediction 515 556 - -
Amo06g0884 1078 MobiDBLite consensus disorder prediction 614 634 - -
Amo06g0884 1078 Coils Coil 816 853 - -
Amo06g0884 1078 Coils Coil 349 376 - -
Amo06g0884 1078 Coils Coil 54 95 - -
Amo06g0884 1078 MobiDBLite consensus disorder prediction 515 547 - -
Amo06g0884 1078 MobiDBLite consensus disorder prediction 1017 1062 - -
Amo06g0884 1078 MobiDBLite consensus disorder prediction 896 930 - -
Amo06g0884 1078 Coils Coil 206 247 - -
Amo06g0884 1078 Pfam Filament-like plant protein, long coiled-coil 92 966 IPR008587 -
Amo06g0884 1078 MobiDBLite consensus disorder prediction 614 648 - -
Amo06g0884 1078 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1078 - -
Amo06g0884 1078 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1078 - -
Amo06g0884 1078 Coils Coil 861 950 - -
Amo06g0884 1078 SUPERFAMILY Tropomyosin 804 966 - -
Amo06g0884 1078 MobiDBLite consensus disorder prediction 1017 1078 - -
Amo06g0884 1078 Coils Coil 138 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0884 Amo-Chr6 12061684 12067755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0884 - - gmx:100789223 1496.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0884 06 12061684 12067755 Amo08g0180 08 3112125 3117027 PCT
Amo08g0180 08 3112125 3117027 Amo06g0884 06 12061684 12067755 PCT