Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0870 ATGGCCATCTCCAGAACTCTTCTTGCCGCAATCCTTATTTCTATCCTCATTCTTCAGATAGTTGAGTCAGCAACAATCGATTGTGATAGTGAATGCAAGAGGAGGTGTGCATTATCATCAAGGCCGAACCTATGTGAGAGAGCCTGCGGCACTTGCTGTAACCGCTGCAATTGTGTGCCGTCGGGCACTTCCGGCCACTACGAGGAGTGCCCTTGTTATGCCAATCAAACCACCCATGGCGGCGTACATAAATGTCCTTAA 261 0.4904 MAISRTLLAAILISILILQIVESATIDCDSECKRRCALSSRPNLCERACGTCCNRCNCVPSGTSGHYEECPCYANQTTHGGVHKCP* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0870 86 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 20 86 - -
Amo06g0870 86 Pfam Gibberellin regulated protein 27 86 IPR003854 -
Amo06g0870 86 PANTHER SNAKIN-2-LIKE 20 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0870 Amo-Chr6 11938672 11939266 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0870 - - gmx:100306171 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0188 08 3215547 3216624 Amo06g0870 06 11938672 11939266 PCT