Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0865 ATGGGGTCGGTTTGTTCATCGGGCATGGCTGAGGAGAAGAAGAAGAAGAAGAATGCAGAGGTTGTTAATGGAGAGAAGACTATAAGGTGTGCTTGGAAGCTTCGGAACAAAAACAAGATCGTTGCTAACAGGAATAATGTATATTCAAGGACTATTCATGGTGTTACAAAACAAAAGAACAAAGAGACTCGGTTTTCAACTGAGTTCAAGAAATCGAATAATCCTACTGCATCACGTGCAAAACAGGGCTCGCAACGTGGCTCCTTGCTCGGCCGAGCCGGGGAGAGGGCGGTGGAAGTTCTGGACACACTTGGAAGCAGCATACCAAAGCTGAGCACAAGTGATGGATTTATCTCTGGCATGAATCTTAATAGAGGGCACAAAATATGTATATTGGCCTTTGAAGTAGCCAACACAATAAACAAAGGAGCAATTCTGTTTCATTCACTCTCTGAAGAAAACATTCAGTTCCTTAAAAAAGAGATCTTTCAATCAGAAGGAGTTCAAAAATTGGTTTCTACTGATACAACAGAGTTACTAAGTCTTGTTGAGGCTGACAAAAGGGAAGAATTCAATGCCTTCTCCAAGGAAGTAGTTAGATTTGGAAATATGTGCAAAGAACATCAGTGGCATAACCTTGATAGATTTTTCTCAAGATTAGGTGTGGATGTCTTGAGCAATAAAGACCTTAAGCTAGAGGCAGAAAAGACAATGCAGGAGTTGATCACACTAGGTCACAATACTGCTGAATTGTACCATGAGTTAAGTGCTTATGACCGTTTTAAACAAGATTATCAAGAAAAGGTTAAGGAGATGGAGTCCTTAAATCTTCCTTTAAAAGGGGAGAGTCTCACAATTATTCAGAGTGAGCTAAAGCATCAAAGAAAGATTGTGAAGAACTTGCAAAGGAAATCTCTCTGGTCCAGAAATTTGGAGGAGGTAGTTGAAAAGCTTGTAGATATTATTACCTATATGCATCGATCAATTTCTAAGTTCCTTGGAAATGATGCAGGTGCAACTGTTGTCAAGTTTACCAGCAATGGTTCTCAAAGACTAGGTGAAGCTGGTCTTGCATTGCACTATGCTAACATTATCAATCAGATAAATATGATGGCATCTCGGCCATCAGCATTTCCTCCAAATATGAGGGACACATTATATCATGGATTGCCCAATAGTATTAAGAGTATCCTTCAATCTAGGTTGCAAAATATGGATATCACTAAAGAGCTTTCCATGACTCAGGTCAAAGCTGAGATGGACAAGACTCTCCAATGGCTAACCCCAATTGCTACAAATACGACCAAAGCACACCAAGGGTTTGGATGGGTTGGTGAATGGGCAAATGGAGGGAATAATAATGAGTTTGGTGACAGCACAGCCAAGGAGAGTAATCTAATTCGCCTCCAAACATTATATTATGCTGAGAGGCATAAGATAGATTCTTACATAATTGAATTGTTGACATGTCTCAACCATTTGGTTACATTTGTAAGATATAGACATCATAGTGGTAGTAATAATGGCATCAAGCCTAAGCAAGGCAAAAGTAACAGTCCTCAGAAGGGTCTTGACTTTCAGTCAAAGATGTTGCAATTCATAACAACCTTGGAGAGGGATAGGAACAACATAGGAACTCATCAACAACTTTCACAAGAAGATAAGAGTTTGTTGGAAGAGGTAATTGCAAGGACAAGGATCCCTGGAGTTAGCAAGAGTGAGAACCTTGCATTGACCAACAAGAAGGAATATGCAAACAGTGGTTTCTTGCATTATAGCAAGAGTGTTGGGAGTTCACCTCTTAATAAGGGCTTATTTGGATTTCACCACCAGAATTCACATGTTTTGGACCTCATAGATGGTTTAAGACATTGA 1875 0.3973 MGSVCSSGMAEEKKKKKNAEVVNGEKTIRCAWKLRNKNKIVANRNNVYSRTIHGVTKQKNKETRFSTEFKKSNNPTASRAKQGSQRGSLLGRAGERAVEVLDTLGSSIPKLSTSDGFISGMNLNRGHKICILAFEVANTINKGAILFHSLSEENIQFLKKEIFQSEGVQKLVSTDTTELLSLVEADKREEFNAFSKEVVRFGNMCKEHQWHNLDRFFSRLGVDVLSNKDLKLEAEKTMQELITLGHNTAELYHELSAYDRFKQDYQEKVKEMESLNLPLKGESLTIIQSELKHQRKIVKNLQRKSLWSRNLEEVVEKLVDIITYMHRSISKFLGNDAGATVVKFTSNGSQRLGEAGLALHYANIINQINMMASRPSAFPPNMRDTLYHGLPNSIKSILQSRLQNMDITKELSMTQVKAEMDKTLQWLTPIATNTTKAHQGFGWVGEWANGGNNNEFGDSTAKESNLIRLQTLYYAERHKIDSYIIELLTCLNHLVTFVRYRHHSGSNNGIKPKQGKSNSPQKGLDFQSKMLQFITTLERDRNNIGTHQQLSQEDKSLLEEVIARTRIPGVSKSENLALTNKKEYANSGFLHYSKSVGSSPLNKGLFGFHHQNSHVLDLIDGLRH* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0865 624 MobiDBLite consensus disorder prediction 69 89 - -
Amo06g0865 624 MobiDBLite consensus disorder prediction 1 20 - -
Amo06g0865 624 Pfam Protein of unknown function (DUF668) 351 436 IPR007700 GO:0045927
Amo06g0865 624 MobiDBLite consensus disorder prediction 69 85 - -
Amo06g0865 624 Pfam Domain of unknown function (DUF3475) 131 187 IPR021864 GO:0045927
Amo06g0865 624 PANTHER OS01G0873900 PROTEIN 1 622 IPR045021 GO:0045927
Amo06g0865 624 PANTHER DUF668 FAMILY PROTEIN 1 622 - -
Amo06g0865 624 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0865 Amo-Chr6 11890807 11895772 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0865 - - gmx:100785193 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0865 06 11890807 11895772 Amo08g0194 08 3282362 3287040 PCT
Amo06g0865 06 11890807 11895772 Amo17g2121 17 110070844 110075523 PCT