Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0864 ATGGATCATCGTCAAGTCTCAGTATTCATTTCCATGTTATTAACACTTCATCTCTCATTATCAGGGGTAATTGCAACCACATTCACATTGGTTAACAAATGTGACTACACAGTATGGCCGGGAATTCTATCTAACGCCGGAGTCTCCCCTCTCTCCACCACCGGCTTCGTTCTCCAACCCGGCCAGTCCACTCCAGTCACCGCCGCAGCTGGCTGGGGCGGCCGCTTCTGGGGCCGAACCCTCTGCTCCCAAGACTCCACAGGAAAATTCTCCTGCGTCACTGGCGACTGCGGCTCAGGAAAGCTTGAGTGCTCCGGCAACGGCGCCACGCCACCGGCCACGCTGGCCGAGTTCACACTTGACGGCTCTGGCGGCCTCGATTTTTTCGACGTCAGCCTCGTCGACGGCTACAACGTCCCCATGCTGGTGGCACCCAGCGGCGGATCCGACGCCGGAAACTGCACCGCCACGGGATGCGTCGGAGATTTGAACGGCGCGTGTCCTTCGGAGCTGAGGGTTATGAGTGAGGATGGAAAACAAGGAGTCGCGTGTAAAAGCGCGTGTGAAGCGTTCGGTTCGCCTCAATATTGCTGCAGCGGCGCGTATGGGACGCCGGATACTTGCAAGCCATCGAGTTACTCGCAAATATTCAAAAGCGCTTGCCCACGCGCCTATAGCTACGCGTACGATGACAAGACCAGCACGTTTACTTGCGCCAATGCCGATTACACAATTACCTTTTGCCCTGCCCCTAGTACAAGTCAGAAAGCGTCAAATGAAGGTGGTTCTTCTGCATCATCCTTACTGGACAATGGCACAATGGTGTACCAAGGCTTCGGTCAGAGCGAGATCTCATGGGCCACGTGCACCCATGTGTTCCAATCTCGAGCAATCGCCGCCGTTGTTGGTGTCACCATGGCAGTTTGGCGCTTCTCCCAGCTCATCTAA 948 0.557 MDHRQVSVFISMLLTLHLSLSGVIATTFTLVNKCDYTVWPGILSNAGVSPLSTTGFVLQPGQSTPVTAAAGWGGRFWGRTLCSQDSTGKFSCVTGDCGSGKLECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVAPSGGSDAGNCTATGCVGDLNGACPSELRVMSEDGKQGVACKSACEAFGSPQYCCSGAYGTPDTCKPSSYSQIFKSACPRAYSYAYDDKTSTFTCANADYTITFCPAPSTSQKASNEGGSSASSLLDNGTMVYQGFGQSEISWATCTHVFQSRAIAAVVGVTMAVWRFSQLI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0864 315 PIRSF PR5 1 287 IPR001938 -
Amo06g0864 315 Gene3D Thaumatin 26 249 IPR037176 -
Amo06g0864 315 PANTHER BNAA02G17480D PROTEIN 18 274 - -
Amo06g0864 315 PANTHER OS03G0233200 PROTEIN 18 274 IPR001938 -
Amo06g0864 315 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
Amo06g0864 315 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
Amo06g0864 315 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Amo06g0864 315 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Amo06g0864 315 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Amo06g0864 315 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Amo06g0864 315 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Amo06g0864 315 CDD TLP-PA 27 248 - -
Amo06g0864 315 SMART tha2 28 249 IPR001938 -
Amo06g0864 315 Pfam Thaumatin family 32 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0864 Amo-Chr6 11874437 11876376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0864 7 267 Receptor kinase-like Gene Family AT5G38280 50.187 1.25e-90 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0864 - - gmx:100787631 523.087