Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0863 ATGGCTTCCTTATTGTTTTCCTATTACTGTTTCTCTTCACACATTGCAATCATCTTGTTTCTATTTTGCTTCGATAAAGGAGCATTAGGGGCCAAGTTTACAATAATTAACAAGTGTGATTACACGGTGTGGCCTGGGATTCTTGCCAATGCTGGCAGCTCCGCATTGGATACCACCGGCTTCCACCTCCCATCCGGCGGGTCGAGGAGCTTTCAAGCCCCACCCAATTGGTCAGGCAGGTTTTGGGGCCGAACCGGCTGCAATTTTGACCCCAATACCCAACAGGGCACCTGCACCACAGGGGATTGTGGCTCCAACCAACTTGAATGCAATGGTTCCGGGGCAGACCCACCCGTAACACTAGCCGAGTTCACAATCGGGTCGGGTTCCCAATCCCAGGATTATTACGACGTCAGCCTGGTTGATGGATACAATCTACCTATGATGGTGGATGCGGGTGGCGGGTCGGGTGAATGTGGGTCAACGGGTTGCGTAGCTGACCTGAACCGGCAATGCCCGAATGAGTTGAGGGTTAGTAACCGAGTGGCATGCAAGAGCGCGTGTGAAGCGTTTCAGAGGGCTGAATACTGCTGCAGCGGCACCTACGCTTCACCTGCCACATGCAAGCCTTCGGTTTACTCCACAATGTTCAAGAGCGCGTGCCCCAAATCGTATAGCTACGCATACGACGACCCTACGAGTACGTTTACGTGTACGGGAGCTGATTATACCATCACATTCTGCCCTTCAACCACAAGCCAAAAATCAGCAAGAGTGTCACCACCTGAAACAGGAACAGGGGAGATGCCTATGATAGTGAACAGTTCATGGTTCTCTGATATTTTTTATGGACTCTCGCCCAAGTCCTACTCTTCCCCAACCTTACTCATTGCCACTCTCACTATCCTAACTTTCCTCAATTTGCAATCCTCATAG 936 0.5075 MASLLFSYYCFSSHIAIILFLFCFDKGALGAKFTIINKCDYTVWPGILANAGSSALDTTGFHLPSGGSRSFQAPPNWSGRFWGRTGCNFDPNTQQGTCTTGDCGSNQLECNGSGADPPVTLAEFTIGSGSQSQDYYDVSLVDGYNLPMMVDAGGGSGECGSTGCVADLNRQCPNELRVSNRVACKSACEAFQRAEYCCSGTYASPATCKPSVYSTMFKSACPKSYSYAYDDPTSTFTCTGADYTITFCPSTTSQKSARVSPPETGTGEMPMIVNSSWFSDIFYGLSPKSYSSPTLLIATLTILTFLNLQSS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0863 311 PANTHER OS03G0233200 PROTEIN 15 258 IPR001938 -
Amo06g0863 311 Pfam Thaumatin family 37 249 IPR001938 -
Amo06g0863 311 CDD TLP-PA 32 248 - -
Amo06g0863 311 SUPERFAMILY Osmotin, thaumatin-like protein 32 250 IPR037176 -
Amo06g0863 311 Gene3D Thaumatin 31 249 IPR037176 -
Amo06g0863 311 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Amo06g0863 311 PRINTS Pathogenesis-related protein signature 80 91 IPR001938 -
Amo06g0863 311 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Amo06g0863 311 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Amo06g0863 311 ProSiteProfiles Thaumatin family profile. 30 249 IPR001938 -
Amo06g0863 311 SMART tha2 33 249 IPR001938 -
Amo06g0863 311 PANTHER THAUMATIN-LIKE PROTEIN 1 15 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0863 Amo-Chr6 11867132 11868622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0863 11 286 Receptor kinase-like Gene Family AT5G38280 45.263 2.55e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0863 - - gmx:100786772 478.404