Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0854 ATGGGAGTTGCTATCCATTATCTTCCTCACATTATTGCTTCATACACTGTGTGTTATGGCAAAACAAAAGGATTGGTGAAACTGCCACCGAATGTAACGGTTCCGGCAGTGTATGTGTTTGGAGATTCGATCGTGGACACAGGAAACAACAACGGTAACAAGCTAACGCCGGCAAAATGCAACTACCCGCCGTATGGCAAAGATTTCAAGGGAAGCATACCGACTGGCCGCTTCAGCAATGGCAAGGTTCCAGCAGACCTTATTGTTGAAGATTTAGGTATTAAAGAGTATCTACCAGCATACTTGGATCCAAATCTCCAATCTAGTGATTTGCTTACTGGGGTGAATTTTGCATCTGGTGGTGCTGGATATGACCCTCTCACTTCACTATCAGCGTCAGCGATACATTTTGACTCTCAAATAGAAATGTTCAAAGATTACATAGGAAAGTTAAGAGGGGTGTTGGAATATGATGTCCCTGCTTACACTGATCTATTGCTCCGCTTAGCCTCTACTTACTTTAAGAGAACAGTGGCTGGAGGAATAACAAGACAGTGTGTGGATAAGATAAATGATGCATGCAAGTTATTTAACGCCAAACTGCCAAATGCATTGGATTCCCTCAACAGGAATCTGCCAGATTCCAGATTTGTATTTATTGATGTCTACAACCCTTTACTTGACGTTATTGTCAACTACCCAAAATATGGGTATAAAGTTGAAGACAGAGGGTGCTGTGGCACAGGCAAAATAGAAGTTACGTTTTTATGCACGCAGTTGCAACCAACTTGTCCCAACGTTTTGGATCATGTTTTTTGGGACAGTTTTCACCCGACGCAATCTGTTTACAAAAAGCTCGTCGCCTCTGTTCTACAAAAATACATACAGCCTCTTTCCGTGTGA 903 0.423 MGVAIHYLPHIIASYTVCYGKTKGLVKLPPNVTVPAVYVFGDSIVDTGNNNGNKLTPAKCNYPPYGKDFKGSIPTGRFSNGKVPADLIVEDLGIKEYLPAYLDPNLQSSDLLTGVNFASGGAGYDPLTSLSASAIHFDSQIEMFKDYIGKLRGVLEYDVPAYTDLLLRLASTYFKRTVAGGITRQCVDKINDACKLFNAKLPNALDSLNRNLPDSRFVFIDVYNPLLDVIVNYPKYGYKVEDRGCCGTGKIEVTFLCTQLQPTCPNVLDHVFWDSFHPTQSVYKKLVASVLQKYIQPLSV* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0854 300 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 154 - -
Amo06g0854 300 Pfam GDSL-like Lipase/Acylhydrolase 139 286 IPR001087 GO:0016788
Amo06g0854 300 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 37 48 IPR008265 GO:0006629|GO:0016298
Amo06g0854 300 Gene3D SGNH hydrolase 162 297 IPR036514 -
Amo06g0854 300 Gene3D SGNH hydrolase 28 161 IPR036514 -
Amo06g0854 300 CDD SGNH_plant_lipase_like 35 294 IPR035669 -
Amo06g0854 300 PANTHER GDSL ESTERASE/LIPASE EXL3 174 295 - -
Amo06g0854 300 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 174 295 - -
Amo06g0854 300 PANTHER GDSL ESTERASE/LIPASE EXL3 13 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0854 Amo-Chr6 11793709 11806325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0854 31 292 Pollen Coat Proteome AT1G75910 33.333 5.16e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0854 - - gmx:100793604 384.03