Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0852 ATGTATGAGATGTTGCGTGAGAGAGTGGTGAGGTTTATTGTTTTGGTATTATTGGGAAGCAAAGTTGCAATGAGAGCAGAAGGTGTCGGACAATATCCGGCATTATTTGCATTTGGAGACTCAATCCTTGATACCGGAAATAACAACCTCCTTGCAACAGTAACTAAGAGTAATTTCCCTCCGTACGGTAGGGATTTTAATGGAGGAAGACCAACCGGAAGATTCGGTAACGGCAGAGTCTTATCAGATATCATAGCTGGGGCTTTGGGAATCAAGGACATATTACCAGCATATCTTGACCCATCCTTGAGCAACGAAGACCTTGTAACCGGCGTGTGCTTTGCTTCTGCGGGAAGTGGGCTTGATGATGCGACGGCCCGAGCACAGGGAGGAGTCTTGACCATGTCGGCCCAGCTAGAAAATTTCAGAGCCTACATTGGAAGGCTGAAATCAGTTGTTGGAGAAGCAGGAGCCAATTCCATAATTTCAAATGCCCTCTTTCTTATCTCTGCCGGAAACAACGACGTTGCCTTCACTTTTAATACCTTGAAGATTGCCATGCCATTCCCTCTTTACACGAATCAATTAATTGGGTGGAACAACGCTTTTCTGCAGGGCCTATATCAACTTGGAGCAAGAAAAGTGTGGGCTCTAAGCACATTGCCATTGGGGTGTTTACCTGCTGGGAGAACCACAGCGGGAGGACCCTTAAGGGTTTGTGCTGAGGCCGCCAATGGAGAAGCACGCATCTTCAATGCCCAATTAGCATCATCTCTTCAGTCTTTGCAGTCCACCCTCCCTGGCTCTTCCCTTCGATTCATTGATGTCTTCACTCCATTTCTTAATATCATACAGAATCCTGTTGCTTCAGGGTTTGTAAACGCTGCAAATGGATGTTGTGGGACTGGAACATATGAGGTGGCAGAGACATGTAATATGCTAGTTCCTTCGTGTCCAAATCCTGCATCTTATGTTTTCTGGGATGCTGCCCATCCATCTCAAGCAGCTTACGAACGCGTCGTGGCTTCTATATTATCATCCAAACCCAAACTTAATAATTATAATGCTTCCACCTATTATTAA 1083 0.4552 MYEMLRERVVRFIVLVLLGSKVAMRAEGVGQYPALFAFGDSILDTGNNNLLATVTKSNFPPYGRDFNGGRPTGRFGNGRVLSDIIAGALGIKDILPAYLDPSLSNEDLVTGVCFASAGSGLDDATARAQGGVLTMSAQLENFRAYIGRLKSVVGEAGANSIISNALFLISAGNNDVAFTFNTLKIAMPFPLYTNQLIGWNNAFLQGLYQLGARKVWALSTLPLGCLPAGRTTAGGPLRVCAEAANGEARIFNAQLASSLQSLQSTLPGSSLRFIDVFTPFLNIIQNPVASGFVNAANGCCGTGTYEVAETCNMLVPSCPNPASYVFWDAAHPSQAAYERVVASILSSKPKLNNYNASTYY* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0852 360 SUPERFAMILY SGNH hydrolase 136 344 - -
Amo06g0852 360 CDD SGNH_plant_lipase_like 33 346 IPR035669 -
Amo06g0852 360 PANTHER GDSL ESTERASE/LIPASE EXL3 1 347 - -
Amo06g0852 360 Pfam GDSL-like Lipase/Acylhydrolase 35 341 IPR001087 GO:0016788
Amo06g0852 360 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 347 - -
Amo06g0852 360 Gene3D SGNH hydrolase 23 350 IPR036514 -
Amo06g0852 360 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 35 46 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0852 Amo-Chr6 11767377 11770222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0852 13 347 Pollen Coat Proteome AT1G75910 43.109 2.10e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0852 - - ahf:112759151 704.131