Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0851 ATGTATAATAAGTTATTCTGTGACTGTGAGAAAATGGTGAGTGTTGTTGCTTTGGTTTTCTTGGGCACCATGTTTGCATTAGTAGCAGCAACAAATGGTGGACAGTATCCAGCATTATTTGCATTTGGAGATTCGATTCTTGATACCGGAAATAACAACCACCTTGCAACTTTAACCAAGTCTAATTTTCCTCCGTACGGAAGAGATTTTATTGGAGGAAAACCAACAGGAAGATTCTGTGATGGGAAAGTCCCATCAGATCTTATAGCGGGAGATCTTGGAATCAAAGGCACGTTACCTGCATATCTTGATCCAAATTTGCGGAATGAAGATCTTTCCACGGGTGTAAGCTTTGCCTCAGGTGGAACAGGAAATGATGATCTCACCGCTCAAACACAGGGTGCTTTATCACTATCGACACAAATGAAAAATTTCCAAGAGTGCATAGGAAGGCTGAGAGCATTTATGGGAGAAGAAAGAGCGAAGTACATCATATCAAACAGCTTGTATCTGCTTTCATCAGGAAACAATGATATTGCACTCACTTATTCTTCACCACTCAGAAGCACCATACCTTTCCCTTTATACGCTTCTCAATTAGTTGGCTGGGCCTCGGATTTTCTCAAGCAACTATACGATGCCGGAGCAAGAAAAGTGTGGGTTCTGAGTACATTGCCATTGGGGTGCTTGCCGGGAGGTAGAACTGTAGCAGGAGGACCTTTAAGATTGTGTTCTGATACTGTTAACAGAGAAGCTCAATTATTCAATGATCAATTAGCATCGGCTGTTAATTCTTTGCAAGGCACACTTTCTGGTTCTGCTTTTCAATTCATTGATATCTATGCTGCTCTGCTTAATATCATACAAAATCCTTTTAGTTCAGGGTTTCTAAATGTTGCAAATGGATGTTGTGGGACTGGACTGGTTGAGATTGGAGAGACATGTAAGTTAGCACTTGGTTCGTGCCCAAATCCTGCAGCATATGTTTTCTGGGACGCTGGTCATCCAACTCAAAGAGCCTATGAGGTCATAGTCTCTTCTATACTGCCAAAATAG 1056 0.4157 MYNKLFCDCEKMVSVVALVFLGTMFALVAATNGGQYPALFAFGDSILDTGNNNHLATLTKSNFPPYGRDFIGGKPTGRFCDGKVPSDLIAGDLGIKGTLPAYLDPNLRNEDLSTGVSFASGGTGNDDLTAQTQGALSLSTQMKNFQECIGRLRAFMGEERAKYIISNSLYLLSSGNNDIALTYSSPLRSTIPFPLYASQLVGWASDFLKQLYDAGARKVWVLSTLPLGCLPGGRTVAGGPLRLCSDTVNREAQLFNDQLASAVNSLQGTLSGSAFQFIDIYAALLNIIQNPFSSGFLNVANGCCGTGLVEIGETCKLALGSCPNPAAYVFWDAGHPTQRAYEVIVSSILPK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0851 351 Pfam GDSL-like Lipase/Acylhydrolase 39 346 IPR001087 GO:0016788
Amo06g0851 351 Gene3D SGNH hydrolase 27 350 IPR036514 -
Amo06g0851 351 CDD SGNH_plant_lipase_like 37 351 IPR035669 -
Amo06g0851 351 SUPERFAMILY SGNH hydrolase 117 350 - -
Amo06g0851 351 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 39 50 IPR008265 GO:0006629|GO:0016298
Amo06g0851 351 PANTHER GDSL ESTERASE/LIPASE EXL3 10 349 - -
Amo06g0851 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0851 Amo-Chr6 11763801 11765374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0851 9 349 Pollen Coat Proteome AT1G75910 41.667 1.18e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0851 - - aip:107646231 703.36