LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo06g0786	TTTACATCTGATCGCGAACAAGCTGTTGCAGGTGGAAGGCGTTTACCATCCCCATTTCTCAGCCGGCTACGAATCACGTGCGGATGCTTAATTAAGATTGTCTCCCTCCAGAAGTTCAGTTCTTTACTCATTGGATTTCAAGCTTTGGTTGTCATCAAGTTGTATGTTGTGGCTAGGGGTAAAATTATGTCAAGAAACGAGGATGATGTGAAAAATGATTCTGATAATGATTTGGGTGATGATTTTGATTATCAACTGAATGCAGAAGAGGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTAAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGAAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCTTGCAAATTTTATAATGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTAGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGGAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGCACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCAGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCACAATTTGCGCATCTG	687	0.4236	FTSDREQAVAGGRRLPSPFLSRLRITCGCLIKIVSLQKFSSLLIGFQALVVIKLYVVARGKIMSRNEDDVKNDSDNDLGDDFDYQLNAEEDDVDSLDSTSKSKEVCGVKRIADLMVKDIWNLEFRTEDEACKFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRVKLDYGCSRWKVSCFVESHNHDLTPPQFAHL	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo06g0786	229	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	63	224	-	-
	Amo06g0786	229	Pfam	FAR1 DNA-binding domain	132	222	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo06g0786	Amo-Chr6	11051196	11052193	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo06g0786		FAR1	5.8e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo06g0786	-		-	adu:107460934	322.013