Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0775 ATGTTAGAATTTGTAGAACTCCCGGATTGTTTTTACCCTAGGGATGCAATTACCATAATAACCCCATGTGCTCCAACACCAAAGCATTCACTCTATCTATCAAATCTTGATGATCAAAAGTTCCTAAGGTTCTCAATTAAGTACTTGTACTTGTTCAAGAAATCAGTGAGCATTGAAGCRTTGAAGTGTTCCTTGTCAAGGGTTCTTGTTGATTACTACCCTTTGGCTGGGAGATTAAGGAAGAACAATAATAATGATGATGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGCTGTTCTTGCTGAGGCTTTCATGGATTCAACTATTGAAGACTTGATTGAAGCTTCTAAGGTTCCAAACAAGTCATGGAGGAAGCTTATGTATAAGGTTGAAGCTCAAAGTTTCTTGGATATTCCTCCGCTTGTTGTTCAGGTAACTAATCTCCGTTGTGGGGGCATGATCCTGTGCACRGCGATCAACCACTGTCTATGCGACGGCATAGGCACTTCACAGTTTCTACATGCGTGGGCCCAACTCACCAAGAACCCCAACACTAAATTGACCATTATACCCTTCCATGGGAGACACGTGTTAAAATCTCGTGATCCCCCTCAGGTGAGGTTTCCMCTCCCGGGATACACCAAAACAAAACCCACTCAACAAGTMGAACTCCTTAAGSTGATGCAATCTCAACCGTTAGTTGCCACGTCATTTACCTTTGGATCCCACCAAGTTCTTCAATTGAAGAAACAATGCATTCCCTCCCTAAAATGCACAACCTTTGAGGTCYTGGCGGCACACACGTGGCGCTCGTGGATTGGCTCGCTTAACTTAAATTCTGACCTCACAGTGAAATTACTCTTTTCTATTAACATAAGAAAAAGTATGAACCTCCCACAAGGGTATTATGGGAATGGATTTGTTCTAGGATGTGCACAAAGTAAAGTGAAGGATTTAGTGTGTGATAATAATAATAATAATAACCTTCATCATGGTGTGAAATTGGTTCAACAAGCTAAGGCTACTACTTGGGACAATAATGGTGAYTACATTAGGTCCATGATTGATTTCTTGGAGGACAAGAATGTGAGAACTGATCTTTCTACTAGCATGGTTATATCACAATGGTCTAAACTAGGGTTAGAAGATTTGGATTTTGGAGTAGGGAAGCCATTGCACATGGGACCTTTAACAAGTGATGTCTATTGCTTGTTCTTACCGGTGGTCGGAGACCCCCACGCGGTAAGGGTTCTCGTGTCGGTGCCGGAGAGTATGGCGGAGAGTTTCCGGCACCACATGATGGTGAAGGAAAGTTGGGAAAGTCATCATGAGGATGTTAATACAAATGGATATCATGTGCAAGAAAAGTTGTTTGTATGA 1389 0.4197 MLEFVELPDCFYPRDAITIITPCAPTPKHSLYLSNLDDQKFLRFSIKYLYLFKKSVSIEALKCSLSRVLVDYYPLAGRLRKNNNNDDDDHKLEVDCNGEGAVLAEAFMDSTIEDLIEASKVPNKSWRKLMYKVEAQSFLDIPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKNPNTKLTIIPFHGRHVLKSRDPPQVRFPLPGYTKTKPTQQVELLKXMQSQPLVATSFTFGSHQVLQLKKQCIPSLKCTTFEVLAAHTWRSWIGSLNLNSDLTVKLLFSINIRKSMNLPQGYYGNGFVLGCAQSKVKDLVCDNNNNNNLHHGVKLVQQAKATTWDNNGDYIRSMIDFLEDKNVRTDLSTSMVISQWSKLGLEDLDFGVGKPLHMGPLTSDVYCLFLPVVGDPHAVRVLVSVPESMAESFRHHMMVKESWESHHEDVNTNGYHVQEKLFV* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0775 462 Gene3D - 218 436 IPR023213 -
Amo06g0775 462 Gene3D - 15 217 IPR023213 -
Amo06g0775 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 437 - -
Amo06g0775 462 Pfam Transferase family 18 436 - -
Amo06g0775 462 PANTHER BNAC03G58010D PROTEIN 14 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0775 Amo-Chr6 10942124 10944496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0775 14 399 Monolignol Biosynthesis Gene Families AT5G48930 29.440 6.26e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0775 - - aip:107645267 897.501