Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0773 ATGGAGTCATCAAATGCATCGAAGAAATCAAGACCCCAATCATCACGCTCTTCATGCCAACACCTTAAGATTAGAAAGGAGAAATTAGGAGATAGGATTGCGGCTCTTCAGCAATTGTGGCTCCTTTTGGCAAGGTATATATATTTATTAGCAAGTATTTTATCTGCAATAATAATAATTACAGATACAGCATCCGTACTTCTAGAGGCAATTGGATACATTAAATTCCTTCAAAGCCAAGTGGAGGTATATATAATATATATTATGAACTCAATTTCATCAAGAGATAATATTATGAACTCGGAGGCAAAGCATGAAGACCTTAGAAGCCGAGGCCTCTGCCTTGTACCAATGTCGTGCATGGCATACATAGCCGGCGATGATGGTGGCAGTTGTGGAGCGTGGCAGCAACCGCCAAATTTTGGCGGCCCAACCTAA 438 0.4087 MESSNASKKSRPQSSRSSCQHLKIRKEKLGDRIAALQQLWLLLARYIYLLASILSAIIIITDTASVLLEAIGYIKFLQSQVEVYIIYIMNSISSRDNIMNSEAKHEDLRSRGLCLVPMSCMAYIAGDDGGSCGAWQQPPNFGGPT* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0773 145 MobiDBLite consensus disorder prediction 1 19 - -
Amo06g0773 145 Coils Coil 19 39 - -
Amo06g0773 145 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 39 - -
Amo06g0773 145 MobiDBLite consensus disorder prediction 1 20 - -
Amo06g0773 145 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 127 - -
Amo06g0773 145 PANTHER OS01G0105700 PROTEIN 3 39 - -
Amo06g0773 145 PANTHER OS01G0105700 PROTEIN 61 127 - -
Amo06g0773 145 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 23 86 IPR036638 GO:0046983
Amo06g0773 145 CDD bHLH_AtbHLH_like 61 83 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0773 Amo-Chr6 10892487 10896212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0773 5 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 49.032 9.98e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0773 - - aip:107647881 198.749