Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0740 ATGATGCTCGTGCCATACGACCACGGAATAATTTCAATGAAACTGGTAGAGAAGTTAAGCAGCTGTTTGGAAACGAACATGCTTCCGGATTTGATTCTGCCACTTATGGAAGACAAGGTGGATCTAACTTCTATACTATGCAACATGACAAGGAGGACCAATGTAGTAGACAATCGGAACAACAGAGTTGCGCTTTTTGATGGCATTGAGGAGGGGGGCATCAGAGCTCAATCTCTCTACTCTTCTTCCCATGAAATTGATGAGCATGATAATGAGCAAGCAATGGATGGATTGCAAGATAGAGTCAATCTCCTGAAAAGGTTATCAGGCGATATACAGGAGGAGGTGGATAGTCATAATCGCATGCTGGATCGTATGGGGAATGATATGGATTCATCAAGGGGAATCCTTTCAGGCACTATGGACAAATTTAAAATGGTATTCGAGACAAAATCCAGCCGGAGAATGTTTACACTTGTAGCATCATTTGTTGTGCTTTTTCTTATAGTGTATTACCTAACTAGGTAA 528 0.4148 MMLVPYDHGIISMKLVEKLSSCLETNMLPDLILPLMEDKVDLTSILCNMTRRTNVVDNRNNRVALFDGIEEGGIRAQSLYSSSHEIDEHDNEQAMDGLQDRVNLLKRLSGDIQEEVDSHNRMLDRMGNDMDSSRGILSGTMDKFKMVFETKSSRRMFTLVASFVVLFLIVYYLTR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0740 175 PANTHER GOLGI SNARE BET1-RELATED 54 175 IPR039897 GO:0015031|GO:0030173
Amo06g0740 175 CDD SNARE_Bet1 88 145 IPR039899 -
Amo06g0740 175 SUPERFAMILY SNARE fusion complex 80 147 - -
Amo06g0740 175 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 85 147 IPR000727 -
Amo06g0740 175 PANTHER - 54 175 - -
Amo06g0740 175 SMART tSNARE_6 80 147 IPR000727 -
Amo06g0740 175 Gene3D - 93 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0740 Amo-Chr6 10497484 10500768 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0740 K08504 - gmx:100814836 225.328