Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0739 ATGGAAGAAGAGGATACGGATCCATCGCCCCCGGGAACTGCTGGCAGATCGTATGAGTGTGTGTTCTGCAAGAGAGGCTTCACAACTGCACAAGCCTTAGGTGGACACATGAACATTCATAGAAAGGACAAGGCCAATAACAGAACCAAACCTACTACTACTTTTCTTATTCCTTCTTCAACTCAACTTCATCATTCCGATCATCATCTCGGCTTCTATTACTTTTCATCATCAACTTCCACACGGAATAATAACAACAACAACAACAATATCTATGAGGTTCATTCTGATTGTTCTTCTTCCAATCAAGGTTATTTTCCTCCACCCAAGGAGAGAAACTTGAGTTTTTGCAATAATAATAATAATCCATCATCATCATCATGTGTTGCTCAAGTTAAAGACAAGGTACAAGATAACAGTGATGAAGGTGGCGGCCTTGATTTAGAGCTCAGACTTGGTCATCATCATCCTTAA 474 0.403 MEEEDTDPSPPGTAGRSYECVFCKRGFTTAQALGGHMNIHRKDKANNRTKPTTTFLIPSSTQLHHSDHHLGFYYFSSSTSTRNNNNNNNNIYEVHSDCSSSNQGYFPPPKERNLSFCNNNNNPSSSSCVAQVKDKVQDNSDEGGGLDLELRLGHHHP* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0739 157 PANTHER OS07G0101800 PROTEIN 6 155 - -
Amo06g0739 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
Amo06g0739 157 Pfam C2H2-type zinc finger 18 42 - -
Amo06g0739 157 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 155 - -
Amo06g0739 157 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
Amo06g0739 157 SUPERFAMILY beta-beta-alpha zinc fingers 15 45 IPR036236 -
Amo06g0739 157 MobiDBLite consensus disorder prediction 135 157 - -
Amo06g0739 157 Gene3D Classic Zinc Finger 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0739 Amo-Chr6 10493539 10494356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0739 3 157 C2H2 Transcription Factor Family AT4G17810 29.121 3.43e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo06g0739 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0739 - - aip:107647878 258.84