Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0734 ATGGTGAAATCTAGCTCGTGCTTGAAGCTCATCACTTGCGGTGGTGGTCCTGATTCTGGAGACACAGATTACCAACCAGTTTCTGAGGTCAAGGATACTAGTGATAAACGTGGTTGGAGTTTCCGGAAGCGATCTGCAAGGCACCGCGTGCTTAGCAACACTGTAATAACAGAAACCCCATCTTCGGCAAACAAGGAGAGTTCAGAATGTAGAAGTATTAGTTTTCAACCAGTGCCGGCTGAACATAATGTTGTTGAGAAAATTCATACAACAAATGTCTCTGATGAGAAGCCTCAGTTACTGTCCTTGGRAAGTTCACAAATACCAGAAACAATTGTTACAGAAACCAAGAATATGGTGGATGTTGACCCAAATCCACCCGAATCAGCTGTTATCATCATCCAGGCTGCCATTAGAGGGTTCTTGGCTCGGAGAGCATTGCTAAAGAGCAAGAATGTAGTCAAGTTGCAAGCTGCTTTTCGAGGCCACTTGGTCAGGAGGCATGCTGTAGGAACGCTTCGATGTGTTCAAGCCATTGTTAAAATGCAACTCCTTGTCCGAGCTCGTCGTGCTCAGCAGGGTAATGTAAATCACGTGACACACACTTCCATGGAGAAGCTAGCGAGCAACAAATTTGCTTGTCAGCTGTTGGAATCAACACCAAGAAATAAACCTATTGGTGTCAAATGTGACCCTTCAAAAAATGATTCTGCTTGGAGATGGTTGGAGAGATGGATGTCTGTTTCATCGGCAGACTCTGCAGATAACGTAAAACCAGTTGGCATGCCTGAACAATCAGACAAAACCAAAAAGGACACTTCTGTTTCTCAAGTGGAAATGGACATTCAAACCGAAGTCGTTCCTCAGTCATCTGGCTCTAGGGAATTGCCTCCAGCATCTGAGGATGAAGATAAGACAACCACTTATGATGCTAATAACTATAACTATGATGCAAACCATTCTACATCTTTCATACCACTTGACTTGGAAGAGGTTCCTGAAAAGACTTTTATCAGCGATGATAAAGGAACAGCAACTGAAATTAATTCTTTCCAAAATGGAAAAATGGAAGCGAATGCAAGTGTCCCGGAGGGACCTGGTCCTATTGATCAGAAGCCTGAAATTGATGGTGAAGCAGACAGACAATCTACAAATCAATTTGACTCAGACCAACTCGAGCCTGAGGGAAAGAAACTTGTGCATGGAACAAGGAAGTCTAATAATCCCGCTTTTATTGCCATGCAGTCAAAATTTGAAGAGCTGACATCAATGGCCAATTCAAGTAAATCAAGCAGTCTGTCCAATCAAGATGCACCACTTGAATCACAAGCAGAGGCATCTTCTATTGTTGCAGTTACTGCACATAGATCGAAGGAGTTCTTCTCATCTGAGAATTCTGCAAATTATCCTTTCATAACTGTTGGGTCGTCTGAATGTGGTACTGAACTCTCAGTAACTTCTACTCTTGATTCACCTGACAGATCTGAGGTCGGGGCTAAGGAAAGTGAGCATGATGCCAAAGATTTGGTAGAAAGGATTGATAATCCTGAAAGTAAGATGGATCATGGTCTTGATCCCAATATAGTGCAGGCTACTCCAACTAATAACGTACCAAACTCATATTCAGATCAATTAGAGATCATTGATGACATAAGCAACAATGTGGTTAATCCAGGGCTGGTTGGGAATTCTCAAGAGGTTGCTGTTAAGCCTGAGCAAAATGCATCTGACCTATTGAGAGAACCGGAAGAGGCCATTCAACAAGATTCCAAGTTGTCTCCGGAAGCTTCGCCAATAAGTCAGCAATATCAACTAGGAACACCTTCTAGTCAGGTATCGATGACCATTCCTGATTCTCAAGGAACACCATCAAGTCAGGTATCTATCAAACCTAAAGAGAAGAAAACCAACAAGACCGGATCCAGCAATAAGCGTAAAATCCTGTCTTCCGATAACAAATCTCCTGCAAGTGCAAATCATGATTCAGGCACAAGAGGTAGTAGGGAACAACAACCAAAAGATCAACCGAGCGGAAAGAGACGCAGTTCCTTCGGCTCAGCAAAATCTGATCACATTGATCAAGAAGCAAGAGATAACAGTAGTAACAATAGTTCTATTCCCCATTTCATGCAAGCTACTGAATCTGCTAGGGCCAAGATGAATGCAAATAACTCTCCAAGATCRAGTCCGGATGTAMATGACCAAGAAATCCATCTTAAGAAGAGACATTCCCTACCCGGTGCAACTGGCAGGCAGGACTCTCCACGCATCCAGCGATCACCACAGTCAAGCACGAAGGGAAATGGTGTGCATCTTCAACATGAGAGAAAATGGCAGAGATGA 2343 0.4311 MVKSSSCLKLITCGGGPDSGDTDYQPVSEVKDTSDKRGWSFRKRSARHRVLSNTVITETPSSANKESSECRSISFQPVPAEHNVVEKIHTTNVSDEKPQLLSLXSSQIPETIVTETKNMVDVDPNPPESAVIIIQAAIRGFLARRALLKSKNVVKLQAAFRGHLVRRHAVGTLRCVQAIVKMQLLVRARRAQQGNVNHVTHTSMEKLASNKFACQLLESTPRNKPIGVKCDPSKNDSAWRWLERWMSVSSADSADNVKPVGMPEQSDKTKKDTSVSQVEMDIQTEVVPQSSGSRELPPASEDEDKTTTYDANNYNYDANHSTSFIPLDLEEVPEKTFISDDKGTATEINSFQNGKMEANASVPEGPGPIDQKPEIDGEADRQSTNQFDSDQLEPEGKKLVHGTRKSNNPAFIAMQSKFEELTSMANSSKSSSLSNQDAPLESQAEASSIVAVTAHRSKEFFSSENSANYPFITVGSSECGTELSVTSTLDSPDRSEVGAKESEHDAKDLVERIDNPESKMDHGLDPNIVQATPTNNVPNSYSDQLEIIDDISNNVVNPGLVGNSQEVAVKPEQNASDLLREPEEAIQQDSKLSPEASPISQQYQLGTPSSQVSMTIPDSQGTPSSQVSIKPKEKKTNKTGSSNKRKILSSDNKSPASANHDSGTRGSREQQPKDQPSGKRRSSFGSAKSDHIDQEARDNSSNNSSIPHFMQATESARAKMNANNSPRSSPDVXDQEIHLKKRHSLPGATGRQDSPRIQRSPQSSTKGNGVHLQHERKWQR* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0734 780 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Amo06g0734 780 Pfam IQ calmodulin-binding motif 151 168 IPR000048 GO:0005515
Amo06g0734 780 MobiDBLite consensus disorder prediction 751 769 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 590 630 - -
Amo06g0734 780 PANTHER PROTEIN IQ-DOMAIN 32 1 775 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 276 296 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 642 665 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 733 747 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 483 542 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 343 357 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 554 571 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 253 320 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 554 780 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 494 521 - -
Amo06g0734 780 Gene3D - 127 174 - -
Amo06g0734 780 ProSiteProfiles IQ motif profile. 149 178 IPR000048 GO:0005515
Amo06g0734 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 192 IPR027417 -
Amo06g0734 780 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Amo06g0734 780 MobiDBLite consensus disorder prediction 698 731 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 408 442 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 528 542 - -
Amo06g0734 780 PANTHER IQ-DOMAIN 5-RELATED 1 775 - -
Amo06g0734 780 MobiDBLite consensus disorder prediction 343 442 - -
Amo06g0734 780 Pfam Protein of unknown function (DUF4005) 690 766 IPR025064 -
Amo06g0734 780 SMART iq_5 149 170 IPR000048 GO:0005515
Amo06g0734 780 SMART iq_5 126 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0734 Amo-Chr6 10439080 10444599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0734 122 780 IQD Protein Family AT1G19870 36.337 3.13e-97 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0734 - - aip:107645297 1481.46