Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0725 ATGAACACGATTCGGTCTCGTTGGTTGTCGAGAAAAATGGTCGAAGAATTTGGCAAATCAGCAACCGCAACCACTTCCTCCACCGAAACACCGCGTTTTTGGCCTTCTCTCTTACGTTGGATTCCAACTTCCACCGACCACATCATCAATGCCGAGAAGCGCCTTCTCTCTCTCGTCAAGACTCCATATGTTCAAGAAAAGGTTAATATAGGCACTGGTCCACCAAATTCTAGAGTTAGATGGTTTGGTTCAGTGAGCAATGAGCCACGGTTTATTAACACCGTTACATTTGATAGTAAAGATGATGCTCCTACCCTTGTCATGGTTCATGGATATGCAGCTTCACAGGGTTTCTTCTTTCGAAATTTCGATGCTCTAGCTAATCGATTTAGGGTCATTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCTGACTTTACATGCAAAAGCACTGAAGAAACTGAAGCATGGTTCATCGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACCTGAGCAATTTTATATTGCTCGGGCATTCTTTTGGTGGTTATGTTGCTTCCAAGTATGCACTTAAGCACCCGGAGCATGTTAAGCACTTGATTTTGGTGGGACCTGCTGGTTTTTCACAAGAAACAGAGAGGATTACAAAGTTCTTATCAACATGGAAAGGATCAATTTTGAACCAGATATGGGAATCTAACTTTACACCTCAAACTATTATTAGAGGTTTAGGTCCTTGGGGTCCTGATATGGTGCGCAGGTATACAAGTGCTAGGTTTGTTACTCATACAACTGGTGAAATGCTGAATGAAACTGAAACTAGTTTGCTGACAGATTATGTTTACCATACTCTAGCGGCTAAAGCTAGCGGTGAGCTGTGCCTCAAACATATATTTTCGTTTGGAGCATTTGCTAGGATGCCCCTTCTTCACAGGGCTTCAGAGTGGAAGGTGCCCACCACTTTCATATATGGTATCCAAGATTGGATGAATTACGAAGGTGCCCAAGAAGCGCGCGACCAGATGAAGGTTCCATGCGAAATCATTAGAGTTCCCCAGGCTGGTCATTTTGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCTGTGTTCTATGCTTGTCGTAGGTTTCTTAGTCCGAATCCCGATAGCGAGTCCCTTCCGGACGCGTTAACCTCTGCATAG 1191 0.44 MNTIRSRWLSRKMVEEFGKSATATTSSTETPRFWPSLLRWIPTSTDHIINAEKRLLSLVKTPYVQEKVNIGTGPPNSRVRWFGSVSNEPRFINTVTFDSKDDAPTLVMVHGYAASQGFFFRNFDALANRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGFSQETERITKFLSTWKGSILNQIWESNFTPQTIIRGLGPWGPDMVRRYTSARFVTHTTGEMLNETETSLLTDYVYHTLAAKASGELCLKHIFSFGAFARMPLLHRASEWKVPTTFIYGIQDWMNYEGAQEARDQMKVPCEIIRVPQAGHFVFIDNPSGFHSAVFYACRRFLSPNPDSESLPDALTSA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0725 396 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 7 389 - -
Amo06g0725 396 Gene3D alpha/beta hydrolase 90 377 IPR029058 -
Amo06g0725 396 PRINTS Alpha/beta hydrolase fold signature 129 144 IPR000073 -
Amo06g0725 396 PRINTS Alpha/beta hydrolase fold signature 192 205 IPR000073 -
Amo06g0725 396 PRINTS Alpha/beta hydrolase fold signature 178 191 IPR000073 -
Amo06g0725 396 PANTHER RE40534P-RELATED 7 389 - -
Amo06g0725 396 Pfam alpha/beta hydrolase fold 104 365 IPR000073 -
Amo06g0725 396 PRINTS Epoxide hydrolase signature 353 375 IPR000639 GO:0003824
Amo06g0725 396 PRINTS Epoxide hydrolase signature 129 144 IPR000639 GO:0003824
Amo06g0725 396 PRINTS Epoxide hydrolase signature 192 205 IPR000639 GO:0003824
Amo06g0725 396 PRINTS Epoxide hydrolase signature 178 191 IPR000639 GO:0003824
Amo06g0725 396 PRINTS Epoxide hydrolase signature 320 336 IPR000639 GO:0003824
Amo06g0725 396 SUPERFAMILY alpha/beta-Hydrolases 93 372 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0725 Amo-Chr6 10309480 10313474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0725 81 286 Acyl Lipid Metabolism Gene Families AT1G64670 26.549 2.64e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0725 - - gmx:100789925 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0725 06 10309480 10313474 Amo08g0154 08 2771592 2775206 PCT
Amo08g0154 08 2771592 2775206 Amo06g0725 06 10309480 10313474 PCT