Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0685 ATGCCACTCATTACAACCCGTGGTATGTATAGGCGACAAGGAATGTGTACCCGCTTCATGACAGTCATCGAATCTGTACTAAGCAGTTTGGGTGTTGACTTATTGGTCATACCATCAATCAAAGAACGCGAGAAGATTTGGGTTTCAGTGTTTGGGTTTGAACCCTTTGATCTGGAAACGAAAACTAGAACTGAAAAAATGAAAATTTTAGTTTGCCCTGACTCGGTTATGCTGAAGAAAAACATTAACAGGTTCCTAATACTGAGAAGAACCAATTCTAATGCGAATCCTGTGTGTCCCAAATGA 306 0.402 MPLITTRGMYRRQGMCTRFMTVIESVLSSLGVDLLVIPSIKEREKIWVSVFGFEPFDLETKTRTEKMKILVCPDSVMLKKNINRFLILRRTNSNANPVCPK* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0685 101 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 92 - -
Amo06g0685 101 PANTHER PHD FINGER PROTEIN 12 1 92 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0685 Amo-Chr6 9689276 9690256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0685 1 80 PHD Transcription Factor Family AT1G05380 45.000 2.74e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0685 - - ahf:112696224 152.525