Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0684 ATGCGAAGGAGGAGAAGGAACAACCTCACGCACTTGGACCAATGCTTCTCAAATTTCATAAACCCTTTCATTCTTCATCAATCTCAATTATCCTCTAATAATAATAATTCCCCGCCATCATCCATCGTCAATCACGATCGCCACCAGATCAATCACAACCGTCCATCATCATCAACCTCAATCATCAAGAACTTCAACACTATCTACGACAATAACACCACCGAACCCGAACCCGAACCTGCAGACTTCGCCACCGCATTTGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGCCGATCCAACTCCATCGTCGAATCCACCCCGTCCTCTTCCTCCTCTTCATCACTAACTTCGTCGTTAACCACCACTGCGCCGGCGGAAGCTTCCTTGGCTTCGGCCGGCGACGAAAGTAAGGCGGTGTTGTTTGAGGGGAGCGTGGCGGTGCCGACGTACTCGCCGGATCCTTACTTGGACTTCCGGCAATCCATGGAGGAGATGGTGGAGGCTCGACCGGAGCTCATGGCGGACGTGAAGTCCAACTGGCACGTGCTGCAGGAGCTTCTGATGTGCTACCTTGCTCTGAACCCGAAGAGCACGCACAAATTCATTCTCGGTGCCTTCGCTGATCTTCTCGTTACACGCATGGCGTTTTCTGACGGTGGCGGTGGCGGTGGCGAAGAATAA 684 0.5307 MRRRRRNNLTHLDQCFSNFINPFILHQSQLSSNNNNSPPSSIVNHDRHQINHNRPSSSTSIIKNFNTIYDNNTTEPEPEPADFATAFASQRFFFSSPGRSNSIVESTPSSSSSSSLTSSLTTTAPAEASLASAGDESKAVLFEGSVAVPTYSPDPYLDFRQSMEEMVEARPELMADVKSNWHVLQELLMCYLALNPKSTHKFILGAFADLLVTRMAFSDGGGGGGEE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0684 227 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 146 212 IPR006458 -
Amo06g0684 227 ProSiteProfiles OVATE domain profile. 148 213 IPR006458 -
Amo06g0684 227 PANTHER TRANSCRIPTION REPRESSOR OFP12 11 217 - -
Amo06g0684 227 Pfam Transcriptional repressor, ovate 152 213 IPR006458 -
Amo06g0684 227 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 217 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0684 Amo-Chr6 9684911 9685594 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo06g0684 Ovate 3.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0684 - - gmx:102660213 206.838