Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0679 ATGGGTATGTCTGCTGCGGCACAGTTCCATGTTTTGGCTGTTGATGACAGCCTAATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCATTTCATGTTACAACAGTGGACTCTGCCATTAAAGCTTTACAATACCTTGGTATGGTTGAAGATAAATTAAAGAGTTATGAGACACCTGAAATTCATCAGGAAGTTAATGTAAATCTGATCATAACAGATTACTGTATGCCAGAAATGACTGGCCATGATTTGCTAAGAAAAATTAAGGAATCAAATTCTCTTAAAGACATACCAGTTGTGATCATGTCCTCAGAGAATGTTCCATCAAGGATCAATAGATGCTTGGAAGATGGGGCTGAAGAATTCTTTCTAAAACCAGTTCAACAATCAGATGTGAACAAGCTGAAACCCCATTTATTGAAATCAAGATCCAAGGAAGAAGAGGAAACCCAACCCATCAACAATAACAAGAGGAAAACAAGAATCAAGTGCACCATTTAA 507 0.3748 MGMSAAAQFHVLAVDDSLIDRMLIERLLKTSSFHVTTVDSAIKALQYLGMVEDKLKSYETPEIHQEVNVNLIITDYCMPEMTGHDLLRKIKESNSLKDIPVVIMSSENVPSRINRCLEDGAEEFFLKPVQQSDVNKLKPHLLKSRSKEEEETQPINNNKRKTRIKCTI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0679 168 ProSiteProfiles Response regulatory domain profile. 10 142 IPR001789 GO:0000160
Amo06g0679 168 MobiDBLite consensus disorder prediction 142 158 - -
Amo06g0679 168 Gene3D - 10 165 - -
Amo06g0679 168 MobiDBLite consensus disorder prediction 142 162 - -
Amo06g0679 168 SUPERFAMILY CheY-like 9 149 IPR011006 -
Amo06g0679 168 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 163 IPR045279 GO:0009736
Amo06g0679 168 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 163 - -
Amo06g0679 168 Pfam Response regulator receiver domain 11 134 IPR001789 GO:0000160
Amo06g0679 168 CDD REC_typeA_ARR 11 137 - -
Amo06g0679 168 SMART REC_2 9 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0679 Amo-Chr6 9651718 9653440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0679 1 150 Response Regulator Gene Family AT3G57040 64.516 4.87e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo06g0679 Response_reg 3.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0679 K14492 - gmx:100787436 258.455